Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2358g00023 ATGGGTTCTATGTCATGTAACTCGTGGTGCTATGGTGGGTTTTCACTTAGTTTAGCACTTTTCTTATGTCTCAATTCTCAACTTGCAACCTCTCGATCAACGATTGAAGTGCTTCCTGGCTTTGAAGGGCTCCTTCCCTTTGAACTTGAAACTGGGTATGTGGGATTGGGGGAAACAGAGGATGATCTACAAGTGTTCTACTACTTTATTAAATCAGAGAACAATCCTAGTAAAGACCCTGTAATGCTTTGGCTATCTGGTGGCCCTGGCTGCTCTTCGTTTTCGGCTCTTGCCTATCAAATAGGCCCACTTGCATTTAAACTTGAGGAGTACAACGGGAGCTTGCCAAATTTGGTCTCGAGGCAATATTCATGGACAAAGGTGTGTAGCATTATTTTTGTAGATTTGCCACTTGGAACTGGATTCTCTTATGCAAAAAATCTCACTGCTCAACGAAGTGACTGGAAATTAGTTCACCATACCCACCAATTTTTTAGGAAGTGGCTGATTGAGCATTCGGAATTTCTTTCAAACAAATTGTACATTGGAGGTGATTCCTACTCTGGCATGTCTCTCCCTGCTGTTGTTCAAGAAATTTCTAATGGAAATGAAAAAGGTCTCAACCCATGGATAAATCTCCAGGGATATGTGCTAGGGAATCCCGTAACAACTCGAAGAGAAAAGAACCATCAAATTCCATTTGCCCATGGAATGGCACTTATTTCTGATGAACTCTATGCGTCATTGCAGAAAAATTGTAAAGGAGAGTATGTAGATATAGATTCTAGAAATGAGTTGTGTTCAAGAGATCTCCACTACTTCGATGAGTGCCTTTCAGGAATTAATCGCTTCAACATTTTGGGTGTCGATTGCCAAGATTATTCGCTTAAGTACCACAAAGCTCTTTTGAGAAGATCTATGACTCAGAAGTTGAAGGCCACTTTTAGTTCCCATCTCACAGTGACAAACTTAAGCTGCGATACTTTTGGTTACTTTCTCTGCAAACTATGGATGAATGATAAAAGTGTTCCCAGGGCACTGCATACTCAAGAGGGAACTGCAGGACAATGGGAACGTTGTAACGGGACCGATTACGAGGAAGATATCTCTAGCAGCTTTGAGTTTCATGTAAATCTCAGTTCAAAAGGCTACCGTTCCTTGATATACAGTGGGGATCATGATTATACTGTTCCTTTCATGTCGACACAAGCATGGATAAGGGCTCTAAACTACTCCATTGTCCATGATTGGAGGCCATGGCATGTAAATGGCCAAGTCGCAGGATACACAAGGACATACTCAAATCAAATGACATTAGCAACTGTGAAGGGTGCGGGGCATGTAACTTCTGAGCTCAAGTCTGAGGAATGTTTTGCCATGTTCGTTAGATGGATATCTAATGTGCCTTTGTAA 1413 0.4161 MGSMSCNSWCYGGFSLSLALFLCLNSQLATSRSTIEVLPGFEGLLPFELETGYVGLGETEDDLQVFYYFIKSENNPSKDPVMLWLSGGPGCSSFSALAYQIGPLAFKLEEYNGSLPNLVSRQYSWTKVCSIIFVDLPLGTGFSYAKNLTAQRSDWKLVHHTHQFFRKWLIEHSEFLSNKLYIGGDSYSGMSLPAVVQEISNGNEKGLNPWINLQGYVLGNPVTTRREKNHQIPFAHGMALISDELYASLQKNCKGEYVDIDSRNELCSRDLHYFDECLSGINRFNILGVDCQDYSLKYHKALLRRSMTQKLKATFSSHLTVTNLSCDTFGYFLCKLWMNDKSVPRALHTQEGTAGQWERCNGTDYEEDISSSFEFHVNLSSKGYRSLIYSGDHDYTVPFMSTQAWIRALNYSIVHDWRPWHVNGQVAGYTRTYSNQMTLATVKGAGHVTSELKSEECFAMFVRWISNVPL 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2358g00023 470 Pfam Serine carboxypeptidase 39 467 IPR001563 GO:0004185|GO:0006508
Gabi2358g00023 470 Gene3D alpha/beta hydrolase 29 302 IPR029058 -
Gabi2358g00023 470 Gene3D - 332 470 - -
Gabi2358g00023 470 SUPERFAMILY alpha/beta-Hydrolases 37 469 IPR029058 -
Gabi2358g00023 470 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 36 449 IPR001563 GO:0004185|GO:0006508
Gabi2358g00023 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 437 450 IPR001563 GO:0004185|GO:0006508
Gabi2358g00023 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 121 133 IPR001563 GO:0004185|GO:0006508
Gabi2358g00023 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 134 144 IPR001563 GO:0004185|GO:0006508
Gabi2358g00023 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 193 IPR001563 GO:0004185|GO:0006508
Gabi2358g00023 470 FunFam Serine carboxypeptidase-like 11 29 470 - -
Gabi2358g00023 470 FunFam Carboxypeptidase 325 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2358g00023 Gabi-Chr2358 257263 268626 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2358g00023 29 58 Calmodulin-binding Proteins AT2G22960 63.333 4.73e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2358g00023 K16296 - gmx:100780069 692.575