Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2358g00015 ATGAGTCAGCGTGTTAGTGACGAGGTTGTGGCAAAAGCCATGGGGGAAATAAGAAGCGGGTCTTCTTCACTTCGACATGGAGATCATACCTTGCCACATATTCATAAGGTTGGAGCTCCTCCTAAGCAGACACTTTTCCAAGAGATCAAACATTCTGTCACTGAAACTTTCTTCTCAGACAACCCCTTAAGAAAATTTAAGGATCAAACAGGATCAAGAAAGTTTGTTCTAGGCCTGCAATCAATCTTCCCCATTCTTGATTGGGGAAGAAGTTATGATCTTAAAAAATTCAGGGGTGATTTGATTTCTGGACTTACCATTGCAAGTCTTTGTATTCCTCAGGACATTGCATACGCAAAGCTTGCAAATTTGGACCCCCAGTATGGACTATACACTAGCTTTGTGGCTCCTCTTGTGTATGCTTTTATGGGAAGCTCAAGAGATATAGCAATAGGACCCGTAGCTGTGGTGTCCCTCTTGCTTGGGACTACCCTTGGCGATGAGATTAGTAACTACAAGAGTCCTGATTACCTGCGTCTTGCATTTACTGCAACTTTCTTTGCAGGAATAACTCAAATGGCACTTGGAGTTTTCAGGCTTGGTTTCTTGATTGATTTCCTATCTCATGCTGCCATTGTGGGATTTATGGCTGGAGCTGCCGTTACTATTGCACTGCAACAGCTTAAAGGTTTGCTTGGCATACAGAACTTCACTAAGAAAACTGATATTGTTTCTGTCATGCGCTCAGTTTGGGGTTCAGTGCACCATGGGTGGAATTGGGAGACAATAGTCATTGGAGTGTCATTCTTGGTCTTTCTTCTTATAACCAAGTATATTGCTAAAAAGAATAAGAAATTCTTTTGGGTAGCTGCAATTGCTCCTATGATCTCTGTCATAGTGTCCACCTTTTGTGTGTTCATTACCAGGGCCGACAAGAAAGGTGTATCAATTGTGCGACATATTAAAAAAGGTGTGAATCCATCATCTGCCAGTGAAATTTTTTTCAGTGGAAAATATCTTGGCCCTGGTGTTCGTATTGGTGTGATTGCTGGTATGATAGCACTCACGGAAGCTGTAGCAATTGGGAGAACATTTGCAGCCATGAAAGACTATTCATTGGATGGTAACCAAGAAATGGTGGCAATGGGAACAATGAACATTATTGGCTCCCTTACATCTTGTTATGTGGCAACAGGATCTTTTTCTCGCTCAGCAGTAAACTATATGGCTGGTTGTAAAACTGCTGTATCAAACATCATTATGTCCATTGTTGTATTATTAACTCTGCTACTCATCACACCGCTATTTAAGTACACACCAAATGCAGTGCTTGCTTCTATTATTATAGCTGCCGTGATGAACCTCGTTAACATTGAAGCAATGGTTCTGCTGTGGAAGATTGACAAATTCGATTTTGTAGCATGCATGGGAGCCTTCTTTGGTGTGATCTTCAAAAGTGTTGAGATTGGCCTTCTAATTGCGGTGGCAATATCTTTTGCTAAAATCCTTTTACAAGTAACTAGGCCAAGGACTGCAGCACTTGGAAAGCTTCCAGGGACTAGTGTTTACAGGAATATCCAGCAATACCCCAAAGCAACCCAGATTCCTGGCATGCTGATTATCAGGGTTGACTCTGCAATCTACTTCTCAAACTCCAACTACATCAAGGACAGAATTTTGAGATGGCTGACTGATGAAGATGCACAAAGGACAGAAAGTGGATTAACAAGAATACAGTATCTCACTGTTGAAATGTCACCTGTTACCGATATTGACACTAGTGGCATCCATGCCTTTGAAGATTTATATAAGAGCCTTCAGAAAAGAGAAGTCAAGCTTGTCTTGGCAAACCCGGGGCCAATTGTAATGGAGAAGCTCCACGCATCCAAGTTAGCAGACTTAATTGGGGAAGATAAAATCTTTCTATCTGTGGCTGATGCTGTTGCAACTTTTAGTACTCCTAAGGGTGAAGTATGA 1977 0.4163 MSQRVSDEVVAKAMGEIRSGSSSLRHGDHTLPHIHKVGAPPKQTLFQEIKHSVTETFFSDNPLRKFKDQTGSRKFVLGLQSIFPILDWGRSYDLKKFRGDLISGLTIASLCIPQDIAYAKLANLDPQYGLYTSFVAPLVYAFMGSSRDIAIGPVAVVSLLLGTTLGDEISNYKSPDYLRLAFTATFFAGITQMALGVFRLGFLIDFLSHAAIVGFMAGAAVTIALQQLKGLLGIQNFTKKTDIVSVMRSVWGSVHHGWNWETIVIGVSFLVFLLITKYIAKKNKKFFWVAAIAPMISVIVSTFCVFITRADKKGVSIVRHIKKGVNPSSASEIFFSGKYLGPGVRIGVIAGMIALTEAVAIGRTFAAMKDYSLDGNQEMVAMGTMNIIGSLTSCYVATGSFSRSAVNYMAGCKTAVSNIIMSIVVLLTLLLITPLFKYTPNAVLASIIIAAVMNLVNIEAMVLLWKIDKFDFVACMGAFFGVIFKSVEIGLLIAVAISFAKILLQVTRPRTAALGKLPGTSVYRNIQQYPKATQIPGMLIIRVDSAIYFSNSNYIKDRILRWLTDEDAQRTESGLTRIQYLTVEMSPVTDIDTSGIHAFEDLYKSLQKREVKLVLANPGPIVMEKLHASKLADLIGEDKIFLSVADAVATFSTPKGEV 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2358g00015 658 SUPERFAMILY SpoIIaa-like 530 651 IPR036513 -
Gabi2358g00015 658 ProSiteProfiles STAS domain profile. 528 651 IPR002645 -
Gabi2358g00015 658 NCBIfam sulfate permease 84 647 IPR001902 GO:0016020|GO:0055085
Gabi2358g00015 658 ProSitePatterns SLC26A transporters signature. 126 147 IPR018045 GO:0008271|GO:0008272
Gabi2358g00015 658 Pfam Sulfate permease family 97 476 IPR011547 GO:0016020
Gabi2358g00015 658 CDD STAS_SulP_like_sulfate_transporter 529 644 - -
Gabi2358g00015 658 PANTHER SULFATE TRANSPORTER 44 650 IPR001902 GO:0016020|GO:0055085
Gabi2358g00015 658 Pfam STAS domain 529 647 IPR002645 -
Gabi2358g00015 658 Gene3D STAS domain 508 653 IPR036513 -
Gabi2358g00015 658 FunFam Sulfate transporter 31 508 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2358g00015 Gabi-Chr2358 130967 134736 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2358g00015 15 655 Inorganic Solute Cotransporters AT1G22150 72.741 0.0 927
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2358g00015 K17470 - gmx:100784124 1113.6