Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2358g00014 ATGGAATATGTTATATCCTTAAGCTCAAGCCTTAGCATTTCCAAGCCATTTCATTTCTTTCCACTCTCAAATAAACACCAAAGACATCCTCGTATGAAGTTTGGTGTTTCATGCAGAGCCACAAAGCTTTCGGGTGTGGATGAGACCAGCCACGTGAACTTCTACAAGATATTGTGTTTGAGTCCCAAAAGTGCAACCATGGATGACATAAAGAGAGCTTATAGATCAATGGCGCTTCTGTACCATCCTGATGTGTGTCAAGATCGTTCCAAGAAAGAGGAATCAACGAGGATGTTTGTGCAGCTCAACGCAGCTTACAAGACTTTGTCGAATCCCAAGCTTCGAGCAGATTATGATTATGATTTGGGTTTGAGAAGCAAAATGAGTGCTAGTGATGAGAGTTGGAGATGTAGGTGGCAGGAACAAATGGTTGAGTTGAAGAGAAGATCTCATAGACGTATGGCTCAAAAGGGTGGAGGATCATGGGGCAGTAGAATGAGGGCGCAAAACATGAAAGACCACACATCTAGTTAA 534 0.427 MEYVISLSSSLSISKPFHFFPLSNKHQRHPRMKFGVSCRATKLSGVDETSHVNFYKILCLSPKSATMDDIKRAYRSMALLYHPDVCQDRSKKEESTRMFVQLNAAYKTLSNPKLRADYDYDLGLRSKMSASDESWRCRWQEQMVELKRRSHRRMAQKGGGSWGSRMRAQNMKDHTSS 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2358g00014 177 Gene3D DnaJ domain 43 153 IPR036869 -
Gabi2358g00014 177 CDD DnaJ 53 111 IPR001623 -
Gabi2358g00014 177 Pfam DnaJ domain 53 119 IPR001623 -
Gabi2358g00014 177 SMART dnaj_3 52 114 IPR001623 -
Gabi2358g00014 177 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 28 173 - -
Gabi2358g00014 177 ProSiteProfiles dnaJ domain profile. 53 122 IPR001623 -
Gabi2358g00014 177 PRINTS DnaJ domain signature 74 89 IPR001623 -
Gabi2358g00014 177 PRINTS DnaJ domain signature 94 114 IPR001623 -
Gabi2358g00014 177 PRINTS DnaJ domain signature 56 74 IPR001623 -
Gabi2358g00014 177 MobiDBLite consensus disorder prediction 148 177 - -
Gabi2358g00014 177 SUPERFAMILY Chaperone J-domain 14 118 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2358g00014 Gabi-Chr2358 128014 128565 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2358g00014 55 119 C2H2 Transcription Factor Family AT1G74250 40.299 1.43e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2358g00014 - - gmx:100783590 217.238