Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2358g00008 ATGAAGGGTGGTTTGTTCTTGCTAGTTATTAATCTTTTGCTTGCTTTATCTATTATTGTCAACAAAGTGCATGGCCAAGGGACGAGGGTAGGGTTCTATTCGAGTACATGTCCTCGTGCTGAGTCCATTGTTAAGTCCACAGTTCAATCCCACGTTAAGTCTGATCCTACTTTGACAGCTGGGTTGCTTAGGATGCACTTCCATGATTGCTTTGTGCAAGGTTGTGACGCCTCTGTTCTCATTTCTGGCACTGCCACTGAGAAAACAGCATTTCCAAACCTTGGTTTAAGAGGATACGAGGCTATTGACGATGCAAAGACGCAGCTCGAGGCTGCGTGCCCTGGTGTTGTGTCTTGTGCTGATATCGTTGCCCTCGCTGCTCGTGACTCTGTCGTTCTGAGTGGTGGGCTGAGTTGGCAAGTGCCTACTGGACGCAAAGATGGGCGCGTGTCACAGGCTTCCGATGTCAATAACTTGCCTGGACCTAGTGATTCTGTTGACGTCCAGAAACAGAAGTTCGCAGCAAAGGGTCTCAACACTCAAGACCTCGTCACCCTTGTTGGTGGACATACCATTGGTACTACAGCATGCCAGTTCTTCAGTAACAGATTGTATAACTTCACCGCAAATGGTCCTGATCCTTCCATCGACCCTTCATTTCTTCCACAACTAAGAGCACTCTGCCCTCAAAACAGTGGCGCTTCAAACCGAGTTGCGCTAGATACCGGTAGTCAAAACAATTTTGATACATCTTACTTTGCTAATTTGAGGAACGGCCGTGGAATTCTGCAATCTGATGAAGCGCTTTGGAATGATGCTTCCACAAAGACATTTGTACAGAGATACTTGGGCTTAAGAGGCTTGCTTGGATTGACATTTGGCGTGGAATTTGGAAAGTCTATGGTGAAGATGAGCAATATTGGATTGAAGTCGGGTGCTGATGGTGAAATTCGCAAGATATGTTCTGCTATTAACTAG 978 0.4632 MKGGLFLLVINLLLALSIIVNKVHGQGTRVGFYSSTCPRAESIVKSTVQSHVKSDPTLTAGLLRMHFHDCFVQGCDASVLISGTATEKTAFPNLGLRGYEAIDDAKTQLEAACPGVVSCADIVALAARDSVVLSGGLSWQVPTGRKDGRVSQASDVNNLPGPSDSVDVQKQKFAAKGLNTQDLVTLVGGHTIGTTACQFFSNRLYNFTANGPDPSIDPSFLPQLRALCPQNSGASNRVALDTGSQNNFDTSYFANLRNGRGILQSDEALWNDASTKTFVQRYLGLRGLLGLTFGVEFGKSMVKMSNIGLKSGADGEIRKICSAIN 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2358g00008 325 SUPERFAMILY Heme-dependent peroxidases 29 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi2358g00008 325 FunFam Peroxidase 31 172 - -
Gabi2358g00008 325 PANTHER PEROXIDASE 25-RELATED 13 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2358g00008 325 CDD secretory_peroxidase 29 324 IPR033905 GO:0004601|GO:0042744
Gabi2358g00008 325 Gene3D Peroxidase, domain 2 160 304 - -
Gabi2358g00008 325 Gene3D - 31 325 - -
Gabi2358g00008 325 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2358g00008 325 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2358g00008 325 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2358g00008 325 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2358g00008 325 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2358g00008 325 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2358g00008 325 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2358g00008 325 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2358g00008 325 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2358g00008 325 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2358g00008 325 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2358g00008 325 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2358g00008 325 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2358g00008 325 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2358g00008 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Gabi2358g00008 325 FunFam Peroxidase 160 304 - -
Gabi2358g00008 325 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Gabi2358g00008 325 Pfam Peroxidase 44 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2358g00008 325 ProSiteProfiles Plant heme peroxidase family profile. 27 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2358g00008 Gabi-Chr2358 83224 85336 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2358g00008 6 325 Peroxidase AT2G41480 62.112 4.20e-148 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2358g00008 K00430 - gmx:100783523 518.079