Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2358g00007 ATGGAGGGTGGATTGTCGAAAAAAAGCTTCCTTCTAATGTTTCTTTTGCTTGCTGCGGCTGTTGTAAACACAGTGCATGGCGAAGTTACATGTGTAGGGTTCTATTCGAGCTCATGTCCACGTGCTGAGTCCATTGTTAGGTCCACAGTTCAATCCTACTTTAGGTCTGACCCTACTTTTGCTGCTGGGTTGCTTAGGATGCACTTCCATGATTGCTTTGTGAGAGGTTGTGACGCTTCTGTTCTCATTGATGGCGACGGCACTGAGAGAAAAGCTAGGCCAAACCTTAGTTTAAAAGGCTTTGAGGTTATTGATGATGCAAAGACTAAGCTCGAGGCTGCGTGTCCTGGTGTTGTGTCTTGTTCTGATATCCTTGCCCTTGCTGCCCGTGATTCCGTTGTTCTCAGTGGTGGACTAAGATGGGAAGTGCCGACTGGACGGAGGGATGGAAGGGTTTCAATTGGAACTGAAGCAGCCATTAATTTGCCAGGTCCTAATGATAGCGTTGCAATCCAGAAGAAGAAGTTTGCTAATAAGGGTCTCAACATTCAAGACCTCGTCATTCTTGCCGGTGGGCACACGATTGGTAGTGCTGCTTGCCAATCATTCGCAGACAGACTATACAGCCCAAATGGCATTGATCCTTCCATAGACCCTTCGTTTGTTCCAACTCTGCGACAAATTTGCCCACAAAACCAACCAACGAAGAGAGTTGCATTAGACACAGGTAGCCAATTCAAATTCGACACTTCTTACTTCGCTAACCTTAAGAAAGGCCACGGAATTCTTCGTTCTGATCAGGTGCTTTGGACTGATGCTTCCACAAGGACCATTGTTCTCAAATACTTAGCCACTGGTCCCTTCAACGTTGAATTTGGCAACTCTATGGTGAAGATGAGCAATGTTGGTATCAAGACCGATGCTAATGGTGAAATTCGCAGGAAATGTTCTGCTGTTAATTAA 963 0.4569 MEGGLSKKSFLLMFLLLAAAVVNTVHGEVTCVGFYSSSCPRAESIVRSTVQSYFRSDPTFAAGLLRMHFHDCFVRGCDASVLIDGDGTERKARPNLSLKGFEVIDDAKTKLEAACPGVVSCSDILALAARDSVVLSGGLRWEVPTGRRDGRVSIGTEAAINLPGPNDSVAIQKKKFANKGLNIQDLVILAGGHTIGSAACQSFADRLYSPNGIDPSIDPSFVPTLRQICPQNQPTKRVALDTGSQFKFDTSYFANLKKGHGILRSDQVLWTDASTRTIVLKYLATGPFNVEFGNSMVKMSNVGIKTDANGEIRRKCSAVN 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2358g00007 320 Gene3D Peroxidase, domain 2 163 299 - -
Gabi2358g00007 320 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Gabi2358g00007 320 SUPERFAMILY Heme-dependent peroxidases 32 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi2358g00007 320 CDD secretory_peroxidase 32 319 IPR033905 GO:0004601|GO:0042744
Gabi2358g00007 320 Gene3D - 33 320 - -
Gabi2358g00007 320 PANTHER PEROXIDASE 25-RELATED 17 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2358g00007 320 FunFam Peroxidase 33 173 - -
Gabi2358g00007 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Gabi2358g00007 320 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2358g00007 320 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2358g00007 320 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2358g00007 320 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2358g00007 320 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2358g00007 320 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2358g00007 320 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2358g00007 320 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2358g00007 320 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2358g00007 320 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2358g00007 320 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2358g00007 320 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2358g00007 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2358g00007 320 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2358g00007 320 Pfam Peroxidase 46 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2358g00007 320 ProSiteProfiles Plant heme peroxidase family profile. 33 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2358g00007 320 FunFam Peroxidase 163 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2358g00007 Gabi-Chr2358 76648 79497 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2358g00007 8 320 Peroxidase AT5G64120 58.589 2.04e-134 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2358g00007 K00430 - gmx:100789249 492.271