Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2357g00012 ATGGATGGGAACAAGGACGATGCGTTGAAATGCTTGAGAATCGGAAAAGAAGCGTTAGAAGCTGGCGATCGCACCCGAGCTTTGAAGTTCGTGATGAAAGCTCGCCGCCTCGACCCCACGCTGCCGATCGACGAACTATTGTCGGCGATAGATAAGGATGCAGGCGATCAACCCCCCGCAGCTGCCTCGGCTGGACCGTCAGAGCAGTCAAAGCCGCCCTCCGGTCAACCTTCTATCCGCCGAAGGGGTCCTGTGGCTGGGGCTTCGGCAGCGGCGTCATCGTCATCCTCATCCTCATCGGTTACATATACTGAGGAGCAAATTTCAATTATCAGAGAGATTAAGAGGAAGAAGAATTACTATGAGATTTTGGGGTTGGAGAAGAATTGTACTGTGGAGGATGTGCGAAAATCATACAGGAAGCTGTCTCTGAAGGTTCATCCGGATAAGAACAAAGCCCCTGGCTCTGAGGAAGCGTTTAAGGCTGTCTCAAAGGCGTTTCAGTGTCTTAGTAATGAAGAGAGCAGGAAGAAGTATGATCTTTCTGGAGAAGATGAATCCGTTTATGAGAGGCGAGCAGCGGCAAGGCCCGCAACCAGGGCTTATAATGGATACTATGAGGCTGATATTGATGCTGAGGAAATATTTAGGAATTTCTTCTTTGGTGGTATGGCTCCTGCAACTAATTTTGGTGGATTCAGTTTTGGACCAGGGATGGGTCATAGGCAGGCTGAACATGGGTCTGCTGGTGGATTTAATGTCAGGGCGCTAATTCAGTTGCTTCCTGTTCTGCTTATTTTGCTTTTAAACTTTTTGCCATCTTCCGATCCTATCTATACACTTTCTCAGTCCTATCCTTTTGAACATCGGTTTACTACACCGAAGGGTGTTAACTACTATGTTAAGTCCACGAATTTTGCTCAAAATTATCCGCCGGGTAGCCGCGAACGCTCAACAGTTGAAGAAAAGGTTGAGAGGGAATACTTCAGCATTCTTCGTCAGAACTGTCATTTTGAGTTACAGCGTCGCCAGTGGGGATATGTCCGGGAAACACCACACTGCGACATGCTTCAGAAGTTTGATTTAGTGAATTGA 1095 0.4758 MDGNKDDALKCLRIGKEALEAGDRTRALKFVMKARRLDPTLPIDELLSAIDKDAGDQPPAAASAGPSEQSKPPSGQPSIRRRGPVAGASAAASSSSSSSSVTYTEEQISIIREIKRKKNYYEILGLEKNCTVEDVRKSYRKLSLKVHPDKNKAPGSEEAFKAVSKAFQCLSNEESRKKYDLSGEDESVYERRAAARPATRAYNGYYEADIDAEEIFRNFFFGGMAPATNFGGFSFGPGMGHRQAEHGSAGGFNVRALIQLLPVLLILLLNFLPSSDPIYTLSQSYPFEHRFTTPKGVNYYVKSTNFAQNYPPGSRERSTVEEKVEREYFSILRQNCHFELQRRQWGYVRETPHCDMLQKFDLVN 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2357g00012 364 CDD DnaJ 119 172 IPR001623 -
Gabi2357g00012 364 PANTHER AT29763P-RELATED 1 359 - -
Gabi2357g00012 364 ProSitePatterns Nt-dnaJ domain signature. 160 179 IPR018253 -
Gabi2357g00012 364 ProSiteProfiles dnaJ domain profile. 119 183 IPR001623 -
Gabi2357g00012 364 Pfam Domain of unknown function (DUF1977) 273 344 IPR015399 -
Gabi2357g00012 364 FunFam Chaperone protein dnaJ 49 115 231 - -
Gabi2357g00012 364 PRINTS DnaJ domain signature 155 175 IPR001623 -
Gabi2357g00012 364 PRINTS DnaJ domain signature 139 154 IPR001623 -
Gabi2357g00012 364 PRINTS DnaJ domain signature 121 139 IPR001623 -
Gabi2357g00012 364 SMART dnaj_3 118 175 IPR001623 -
Gabi2357g00012 364 Pfam DnaJ domain 119 180 IPR001623 -
Gabi2357g00012 364 SUPERFAMILY Chaperone J-domain 115 236 IPR036869 -
Gabi2357g00012 364 MobiDBLite consensus disorder prediction 48 99 - -
Gabi2357g00012 364 Gene3D DnaJ domain 115 230 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2357g00012 Gabi-Chr2357 217113 218909 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2357g00012 114 180 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 38.028 5.67e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2357g00012 K09518 - gmx:100793797 553.518