Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2349g00001 ATGGGTTTCCGTTTACCTACTATTCGACGTGCATCATTCTCTGCTAGCCAAGCAGCTTCAAAATCCGTAGAAGTTCCAAAGGGCTATCTTGCAGTGTATGTTGGAGAGAAACAGACGCGGTTTGTGATCCCAATATCATACCTGAACCAACCTTCATTTCAGGATTTGCTGAACCAAGCTGAGGAGGAGTTTGGATATGATCATCCCATGGGTGGCCTCACAATTCCATGCAGCGAAGATGAATTCCTTCACATCAAATCTCGCTTGAATGGCCTATAA 279 0.448 MGFRLPTIRRASFSASQAASKSVEVPKGYLAVYVGEKQTRFVIPISYLNQPSFQDLLNQAEEEFGYDHPMGGLTIPCSEDEFLHIKSRLNGL 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2349g00001 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 18 89 IPR003676 GO:0009733
Gabi2349g00001 92 Pfam Auxin responsive protein 10 87 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2349g00001 Gabi-Chr2349 8079 8570 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2349g00001 3 85 Calmodulin-binding Proteins AT3G43120 43.373 5.51e-18 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2349g00001 - K14488 gmx:100816803 154.836