Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2348g00012 ATGCCTCAAGGGAGCAAAAAGAGCATACATTTTAGCAAACTATATTCTTTTCTTTGTTTGAAATCTCCGTTTAGAGATGGTCATTCCCAAATTGGGCAGAAAGGGTACTCAAGGGTTATATACTGCAATGATCCTGATAACCAAGAAGCAATTCAGTTGAATTATAGAGGCAACTATGTTTCAACGACCAAGTATACAGCTTTTAATTTTTTCCCCAAGTCTTTATTTGAGCAGTTCAGAAGGGTTGCAAATATCTACTTTCTTATTGTTGCGTGTGTTTCATTTAGTCCATTGGCACCTTACACAGCTCTAAGTATTGTTGCACCGTTGCTTGCTGTGATTGGAGCTACTATGGCCAAGGAAGCTGTAGAAGATTGGAGGAGGAGACAGCAGGATATAGAGGCAAACAACCGAAAGGTTCAGGTATATGGTAGAAATTATACATTTTTTGAGACTAGATGGAAGAAGCTTCGTGTTGGTGACATCATTAAAGTGTTTAAGGATGAATTCTTTCCTGCTGATCTTCTTCTGCTTTCATCAAGCTATGAGGATGGGGTTTGCTATGTTGAGACAATGAATCTTGATGGAGAAACTAATCTAAAATTAAAGCATGCCCTGGAGGCGACAACTCATCTTCGTAATGAAAAATCTCTCCAAAAGTTTAGGGCTGTGGTCAAATGTGAGGATCCTAATGAAAATCTGTACTCATTTATAGGTACTTTAGAATATGAGGGTAAAGAACACCCTCTTTCCTTGCAGCAGATCCTTTTAAGAGATTCTAAGCTGAAAAACACTGAATATATCTATGGTGTTGTTATCTTTACTGGCCATGATACAAAAGTGATGCAGAATTCCACTGATCCTCCATCCAAGAGAAGCAAAATTGAGAGAAAAATGGATAAGATAATCTACATCCTCTTTAGTACTTTGATTTTGATATCCTTTATTGGTTCTGTCTTTTTCGGTGTTGAGTCCAAAAAGGATATTAGTACTGGCAGGCATAGAAGATGGTATCTTCGTCCAGACAATGCAACAGTGTTTTACGATCCTAGAAGGGCAACACTTGCTTCTGTTCTTCATTTTCTGACCGCCCTTATGTTGTATGGATATCTAATTCCAATATCGCTTTATGTGTCCATAGAAATTGTGAAAGTTCTGCAGAGTATTTTCATCAACCAAGATCAGGAAATGTATTATGAAGAAGCAGATAGGCCAGCTCATGCACGCACATCTAATTTGAACGAGGAACTTGGTCAAGTTGATACAATATTGTCTGACAAAACTGGTACTTTGACATGTAACTCAATGGAGTTTGTTAAATGTTCCATAGCTGGAATTCCATATGGTCGTGGTATGACAGAAGTGGAGAAGGCACTTGCTAGGAGAGGGAGAAATGGGGAATCTGAAGTTGATGATGTATCATCTGAGTTCTTGGGCCAGAGTAGTGATGCCGTGGACTCTCAGCACCCAATTAAGGGCTTTAACTTTAGAGATGAACGAGTAATGAATGGGCAGTGGGTTAATGAACCACATCCAGACATCATTCAGAGATTCTTTCGAGTTTTGGCTATTTGTCATACAGCTATTCCAGATGTACATAAAGAATCAGGAGAAATTTCCTATGAAGCTGAGTCACCAGATGAAGCAGCTTTTGTCATAGCTGCAAGGGAGCTTGGTTTTGAGTTTTTTGCAAGGACACAAACAAGCATATCATTGCATGAGTTGAATTATGAAAGTGGAAAAAAGGTTGACAGAGTGTACCAGCTTCTGCATGTCTTAGAGTTCAGCAGTTCCCGCAAAAGAATGTCAGTGATAGTGAGGAATGCAGAAAATCAATTATTGCTCCTATGCAAGGGTGCAGACAGTGTTATGTTTGAAAGGCTCTCGCAATATGGAAGACAGTTTGAGGCTGAGACCAAAGATCAAATCAAAAGATATGCGGAGGCAGGTTTAAGAACTCTTGTAGTCGCATACCGCGAACTTGGTGAAGAAGAATATAAGCTGTGGGACAAGGAGTTTACAAAGACCAAAACTTCTGTAGCAGCAGACCGAAATGCACTAGTGGATGCTGCTGCTGATAAGATGGAAAGAGATTTGATACTTCTTGGTGCTACAGCAGTTGAGGATAAGCTGCAAAAGGGGGTTCCTGAATGTATTGTAAAGCTTGCCAAGGCAAGAATCAAGTTATGGGTATTGACTGGGGACAAGATGGAAACTGCTGTCAACATAGGGTATGCTTGTAGTTTACTTAGACAAGACATGAAACAGATAGTGATCACTCTTGATTCACCAGATATCCTATCCTTGGAAAAACAAGGGGACAAGGAGGCTCTAATAAAGGCCTCTCTTGAAAGCATTAAGAAGCAAATTAGTGAGGGAGTATCACAAATCAAGTCTGCGAAAGAGAGTTCTAATACAGATAAAGGAAGTTCTTCTGACTTACCAAAGAAAAAAAAAGGAAGTTCTTCTGAATTTGCCTTGATAATTGATGGGAAGTCCTTGGACTATTCTCTTAACAAGATTTTGGAGATGTCCTTCTTTGAGCTAGCAATTAATTGTGCTTCTGTCATATGTTGTCGATCTTCACCCAAACAGAAAGCTCGTGTTACAAGATTGGTGAAATTGGGAACAGGAAAGACAACGTTATCTATAGGCGACGGGGCAAATGATGTTGGCATGCTTCAGGAAGCTGATATTGGAGTTGGCATAAGTGGTGCTGAAGGGATGCAGGCTGTAATGGCAAGTGATTTTGCAATAGCTCAATTCCGTTTTCTGGAGCGTTTGTTGTTGGTACATGGCCACTGGTGTTATAGGCGAATATCATTGATGATATGCTATTTTTTCTATAAAAACATTGCATTTGGATTTACCTTATTTTGGTTTGAGGCATATGCTTCTTTCTCCGGTCAACCTGCCTACAATGATTGGTACATGTCATTTTACAATGTTTTCTTCACTTCACTTCCAGTAATCGCTCTAGGTGTATTCGATCAGGATGTTTCTGCCAAACTTTGCCTGAAGTATCCCTTTCTATATCTAGAAGGAGTAGAGGACACCCTCTTCAGCTGGCCCCGGATTATTGGCTGGATGTTGAATGGAGTCATTAGCTCCATAGTAATCTTCTTCTTGACTACTAATTCAGTCTTAAATCAAGCCTTCAGAAGAGATGGTCAAGTGGTTGATTTTGAAATACTTGGGGTCACAATGTATACTTGTGTGGTGTGGACAGTGAATTGCCAAATGGCACTTTCCATCAACTACTTCACTTGGATCCAGCATTTTTTTATCTGGGGTAGCATTGCCTTTTGGTATGTATTCGTGTTAGTTTATGGTTATCTCTCTCCAGCCATATCCACAACAGCTTACAGGGTCTTTGTGGAAGCATGTGCTCCCAGTGTTCTATATTGGCTAGTTACCCTTTTGGTTGTTGTGTGTGTGCTTCTACCCTATTTCTCCTATAGGTCTTTCCAAAGTCGATTTCTACCTATGTACCATGATATTATACAGAGAAAACATGTAGAAAGGTCTGAAATTGACATGTCTGATGAGTTACCCAAACAAGTTCAGGGCAAACTAATACATCTGAGAGAGAGATTGAAGCAAAGGGAGGTGTAA 3615 0.3983 MPQGSKKSIHFSKLYSFLCLKSPFRDGHSQIGQKGYSRVIYCNDPDNQEAIQLNYRGNYVSTTKYTAFNFFPKSLFEQFRRVANIYFLIVACVSFSPLAPYTALSIVAPLLAVIGATMAKEAVEDWRRRQQDIEANNRKVQVYGRNYTFFETRWKKLRVGDIIKVFKDEFFPADLLLLSSSYEDGVCYVETMNLDGETNLKLKHALEATTHLRNEKSLQKFRAVVKCEDPNENLYSFIGTLEYEGKEHPLSLQQILLRDSKLKNTEYIYGVVIFTGHDTKVMQNSTDPPSKRSKIERKMDKIIYILFSTLILISFIGSVFFGVESKKDISTGRHRRWYLRPDNATVFYDPRRATLASVLHFLTALMLYGYLIPISLYVSIEIVKVLQSIFINQDQEMYYEEADRPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSIAGIPYGRGMTEVEKALARRGRNGESEVDDVSSEFLGQSSDAVDSQHPIKGFNFRDERVMNGQWVNEPHPDIIQRFFRVLAICHTAIPDVHKESGEISYEAESPDEAAFVIAARELGFEFFARTQTSISLHELNYESGKKVDRVYQLLHVLEFSSSRKRMSVIVRNAENQLLLLCKGADSVMFERLSQYGRQFEAETKDQIKRYAEAGLRTLVVAYRELGEEEYKLWDKEFTKTKTSVAADRNALVDAAADKMERDLILLGATAVEDKLQKGVPECIVKLAKARIKLWVLTGDKMETAVNIGYACSLLRQDMKQIVITLDSPDILSLEKQGDKEALIKASLESIKKQISEGVSQIKSAKESSNTDKGSSSDLPKKKKGSSSEFALIIDGKSLDYSLNKILEMSFFELAINCASVICCRSSPKQKARVTRLVKLGTGKTTLSIGDGANDVGMLQEADIGVGISGAEGMQAVMASDFAIAQFRFLERLLLVHGHWCYRRISLMICYFFYKNIAFGFTLFWFEAYASFSGQPAYNDWYMSFYNVFFTSLPVIALGVFDQDVSAKLCLKYPFLYLEGVEDTLFSWPRIIGWMLNGVISSIVIFFLTTNSVLNQAFRRDGQVVDFEILGVTMYTCVVWTVNCQMALSINYFTWIQHFFIWGSIAFWYVFVLVYGYLSPAISTTAYRVFVEACAPSVLYWLVTLLVVVCVLLPYFSYRSFQSRFLPMYHDIIQRKHVERSEIDMSDELPKQVQGKLIHLRERLKQREV 1204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2348g00012 1204 Pfam Phospholipid-translocating ATPase N-terminal 40 103 IPR032631 -
Gabi2348g00012 1204 SFLD C1.7: P-type atpase like 406 935 - -
Gabi2348g00012 1204 PRINTS P-type cation-transporting ATPase superfamily signature 884 903 - -
Gabi2348g00012 1204 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Gabi2348g00012 1204 Pfam Phospholipid-translocating P-type ATPase C-terminal 912 1162 IPR032630 -
Gabi2348g00012 1204 NCBIfam phospholipid-translocating P-type ATPase 55 1170 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Gabi2348g00012 1204 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Gabi2348g00012 1204 FunFam Phospholipid-transporting ATPase 544 702 - -
Gabi2348g00012 1204 SUPERFAMILY Calcium ATPase, transduction domain A 143 284 IPR008250 -
Gabi2348g00012 1204 Gene3D - 114 286 - -
Gabi2348g00012 1204 FunFam Phospholipid-transporting ATPase 702 924 - -
Gabi2348g00012 1204 CDD P-type_ATPase_APLT_Dnf-like 57 1044 - -
Gabi2348g00012 1204 Pfam Cation transport ATPase (P-type) 542 630 - -
Gabi2348g00012 1204 Gene3D - 703 924 IPR023214 -
Gabi2348g00012 1204 Gene3D - 547 702 IPR023299 GO:0000166
Gabi2348g00012 1204 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 501 661 IPR023299 GO:0000166
Gabi2348g00012 1204 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 39 1173 - -
Gabi2348g00012 1204 MobiDBLite consensus disorder prediction 797 819 - -
Gabi2348g00012 1204 NCBIfam HAD-IC family P-type ATPase 852 966 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Gabi2348g00012 1204 SUPERFAMILY Calcium ATPase, transmembrane domain M 48 1161 IPR023298 -
Gabi2348g00012 1204 SUPERFAMILY HAD-like 412 929 IPR036412 -
Gabi2348g00012 1204 FunFam Phospholipid-transporting ATPase 116 286 - -
Gabi2348g00012 1204 SFLD p-type atpase 406 935 IPR044492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2348g00012 Gabi-Chr2348 118725 127715 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2348g00012 9 1169 Primary Pumps ATPases AT1G68710 63.980 0.0 1607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2348g00012 K01530 - gmx:100817020 2148.63