Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2346g00001 ATGGTGGCAGAGACTGATTTCAAGTCTCAGGTAGCTACATTGGAAGGTGGTGGAGGTAGTGGTGGGTGCCTCAAGGGCAATGTTATGTCTGCCACAGAGGATCAAAATGATGATACAGTTGGGGAATTGAATCAATCTATTGGAAAACCTCCAAGGGACCATTCAATTGTTCGTCATTGTAGCAGCACTTTGCGGTTGATTGAACAGGAATCAGATATTGGGATTATAGGCTTGAAATCAACCACAGAAGAAAAATTAAAGATTTCACCAATATTGCGGTCTGGAAGCTGTTCTGAGAAAGGACCAAAGCAGTACATGGAGGATGAGTTCATCTGTGCTGATATACTCCGCGAATTTGTAGGTCCAGGAACTAACCTCCCTTCTCCAGCAGCATTTTATGGGGTATTTGATGGACATGGTGGTACTGATGCAGCATCATTTATCAAAAATAACATTCTTAAGTTTATAATTGAAGACTCTCATTTCCCTTCTATCATTAAGAAAGCTGTTAGGAGTGCGTTTGTTAAAGCTGATCATGCATTTGCAGATGCTAGTGCTGATCTTGATAGTTCTTCAGGCACCACTGCTCTGATAGCCCTTGTATTGGGAAGGGACATGTTGATTGCTAATGTAGGTGATTCGCGGGCTGTATTGGGGAAAAGGGGTAGAGCCATTGAACTTTCTAAAGACCATAAACCTACTTGCACTTCTGAAAGATTGAGAATTGAGAAATTGGGTGGTGTCATCTATGATGGATACCTTAATGGCCAACTATCAGTGGCACGTGCTCTTGGAGATTGGCATATTAAAGGTTCTAAGGGTTCTAAAAGTCCCTTAAGCTCAGACCCGGAGATGGAGGAGACTGTTTTGACAGAAGAAGATGAGTTTTTGATATTGGGGTGTGATGGATTATGGGATGTGATGAGCAGCCAGTGTGCTATTACAATGGTGAGGAAGGGGCTCATGGAGCATAATGATCCTGAAAAATGTGCAAGGGCACTTGTGACAGAAGCACTCCAAAGAAACACATGTGATAATCTTACAGTTGTGGTGATTTGTTTCTCCAAAGATCCACCTCCTAAAATTGAAATTTCTCGATCACATAGGAGGAGGAGTATTTCAGCTGAAGGCCTGGATCTTCTCAAGGGTATTATGAATGGTAAATGA 1167 0.4216 MVAETDFKSQVATLEGGGGSGGCLKGNVMSATEDQNDDTVGELNQSIGKPPRDHSIVRHCSSTLRLIEQESDIGIIGLKSTTEEKLKISPILRSGSCSEKGPKQYMEDEFICADILREFVGPGTNLPSPAAFYGVFDGHGGTDAASFIKNNILKFIIEDSHFPSIIKKAVRSAFVKADHAFADASADLDSSSGTTALIALVLGRDMLIANVGDSRAVLGKRGRAIELSKDHKPTCTSERLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGSKGSKSPLSSDPEMEETVLTEEDEFLILGCDGLWDVMSSQCAITMVRKGLMEHNDPEKCARALVTEALQRNTCDNLTVVVICFSKDPPPKIEISRSHRRRSISAEGLDLLKGIMNGK 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2346g00001 388 SMART PP2C_4 83 352 IPR001932 -
Gabi2346g00001 388 PANTHER PROTEIN PHOSPHATASE 2C 82 352 IPR015655 GO:0004722|GO:0006470
Gabi2346g00001 388 Gene3D - 78 358 IPR036457 -
Gabi2346g00001 388 ProSiteProfiles PPM-type phosphatase domain profile. 93 354 IPR001932 -
Gabi2346g00001 388 MobiDBLite consensus disorder prediction 29 43 - -
Gabi2346g00001 388 SMART PP2C_SIG_2 107 354 IPR001932 -
Gabi2346g00001 388 MobiDBLite consensus disorder prediction 25 54 - -
Gabi2346g00001 388 FunFam Probable protein phosphatase 2C 22 78 357 - -
Gabi2346g00001 388 CDD PP2Cc 93 354 IPR001932 -
Gabi2346g00001 388 ProSitePatterns PPM-type phosphatase domain signature. 132 140 IPR000222 GO:0043169
Gabi2346g00001 388 SUPERFAMILY PP2C-like 88 355 IPR036457 -
Gabi2346g00001 388 Pfam Protein phosphatase 2C 94 346 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2346g00001 Gabi-Chr2346 6857 10073 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2346g00001 76 386 PP2C-type Phosphatase Gene Family AT3G51470 73.955 8.72e-172 480
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2346g00001 K14803 - gmx:100786416 549.28