Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2344g00025 ATGGAGAGCAGTGACACAAACACCCCAACTTACTCTGCCCCACTTTCTCACTCTCCCACTTCCTCATCCTCCTCACCACAACCACAACCACCTCCTCATGTTATCATGACCCCTTGTGCTGCATGCAAGATTTTGAGGCGAAGATGTGCTGAGAAATGTGTATTGGCACCTTATTTCCCTCCCACTGAACCTGCAAAGTTTACCATTGCTCACAGAGTCTTCGGAGCCAGCAACATCATCAAACTCTTACAGGAACTTCCAGAGTCTCAAAGAGCTGATGCAGTGGCTAGCATGGTTTACGAGGCTAGTGCAAGAATAAGAGACCCAGTTTATGGTTGTGCAGGATCAATTTGCCAGCTCCAAAAGCAGGTCAATGAGCTTCAAGCACAATTAGCCAAGGCACAAGCTGAGCTTGTGAACATGCAATTCCAGCAAGCCAATCTTATGGCTTTAATTTGCATGGAAATGACACAAAGTCCACAGGAATCACCACAACAATCTGCGGATAACTTCATTTTGAGTCCTCCCCACAGCAATGGCTATCAAATTCAAAGCGGTATGAACTTCTTTGAGGAGAACACTAGCATTAACTCATTATGGGAACCTCTTTGGACATGA 618 0.4563 MESSDTNTPTYSAPLSHSPTSSSSSPQPQPPPHVIMTPCAACKILRRRCAEKCVLAPYFPPTEPAKFTIAHRVFGASNIIKLLQELPESQRADAVASMVYEASARIRDPVYGCAGSICQLQKQVNELQAQLAKAQAELVNMQFQQANLMALICMEMTQSPQESPQQSADNFILSPPHSNGYQIQSGMNFFEENTSINSLWEPLWT 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2344g00025 205 Pfam Lateral organ boundaries (LOB) domain 38 135 IPR004883 -
Gabi2344g00025 205 MobiDBLite consensus disorder prediction 1 23 - -
Gabi2344g00025 205 ProSiteProfiles LOB domain profile. 37 138 IPR004883 -
Gabi2344g00025 205 Coils Coil 117 144 - -
Gabi2344g00025 205 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 37 165 - -
Gabi2344g00025 205 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2344g00025 Gabi-Chr2344 317726 320397 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2344g00025 33 205 AS2 family AT1G07900 63.636 3.72e-77 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gabi2344g00025 LOB 2.6e-41 No_clan