Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2344g00014 ATGAAACAGTTCATAGAAAACTTGCCGTCAATGGATCTGATGCGCTCCGAGAAGATGACCTTCGTTCAACTCATTATCCCAGCCGAGTCCGCTCAACGAGCCATCTCCTATTTGGGCGAACTCGGTCTCCTTCAATTCCGAGACTTAAATGCCGAAAAAAGCCCCTTCCAGAGAACGTTTGTTAACCAGGTAAAGCGATGTGCAGAAATGTCAAGAAAGCTACGGTTCTTCAAGGATCAAATCAATAAAGCCAGTTTAATGTCTTCGCTTTCTGTCTTGCAACCAGATATTTACTTGGAGGATTTAGAGACACAACTTGCTGAGCATGAACATGAGCTAATTGAAATGAATTCTAACAGTGAGAAACTTCAGCAATCATATAATGAACTCTTGGAGTTCAAGATTGTATTGCAAAAGGCATGTGGTTTTCTTGTTTCAAGTCCTGGCCATGCTGTTTCAGAAGAGAGAGAACTGGAGGAGAATGTATACTCAAATGGAGACTACGTCGAGACACCTCTACAGGAAACAAGGCCTGGACCATCAAATCAATCTGGTTTAAGATTTATCAGTGGGATAATTTGTAAATCCAAAGTTCTTAGGTTTGAAAGGATGTTGTTTCGTGCTACAAGAGGAAATATGCTTTTCAATCAGGCACCGGCTGATGAACAAATCATGGATCCTATTTCAACCGAGATGGTTGAGAAAACAGTGTTCGTTGTGTTTTTCTCTGGGGAGCAAGCAAGAACAAAGATTCTGAAAATTTGTGAGGCATTTGGTGCAAATTGTTACCCTGTTCCTGAAGATATAAGTAAACAGAGGCAAATAACTAGGGAGGTTTCATCACGTCTTGATGACTTAGAGGCAACTTTGGATGCTGGGATCAGGCATCGGAATAAGGCTCTAGCTTCTTTAGGAGGTCATTTAGCAAAATGGATGGACATGGTAAGAAGAGAGAAGGCTGTGTATGATACACTGAACATGTTAAATTTTGATGTCACCAAAAAATGTCTTGTTGGAGAGGGCTGGTGTCCTATGTTTGCAAAAGTACAGATTCAGGAGGCATTGCAACGTGCAACTTTTGACAGCAATTCTCAAGTTGGCATAATCTTTCATTCAATGGATGCACTGGAATCACCACCAACATATTTTAGGACCAACTATTTCACAAGTCCATATCAGGAAATTGTTGATGCATATGGTGTTGCAAGATATCAAGAAGCAAATCCTGCAGTTTACACAACTATTATATTCCCATTTCTTTTTGCGGTGATGTTTGGGGACTGGGGTCATGGAATTTGCCTGTTGCTGGGAGCGTTGGTTCTTATTGCACGTGAAAGCAAGCTCAGCACTCGGCGACTTGGAAGCTTTATGGAGATGCTATTTGGTGGGCGCTATGTGCTTCTTTTGATGTCACTATTTTCAATCTATTGTGGGTTAATCTACAACGAATTCTTCTCTGTTCCTTTTCACATATTTGGTGCTTCTGCTTATAAATGCCGAGATAGTTCATGCAGGGATGCACATACTGTTGGCTTAGTAAAATACCGAGAACCATACCCATTTGGTGTGGATCCCAGCTGGCGTGGAAGTCGTTCAGAATTGCCTTTTCTGAACTCTCTCAAGATGAAGATGTCCATTCTGCTTGGTGTGGTGCATATGAACTTGGGAATTATATTAAGTTATTTCAATGCTCGTTTCTTTGGCAACTCACTGGATATAAGGTACCAGTTTGTGCCACAGATAATTTTCCTTAACAGTCTATTTGGGTATCTTTCCCTTCTCATTGTTCTCAAGTGGTGTACTGGCTCCCAGGCGGACCTTTATCATGTAATGATTTACATGTTTTTAAGCCCATTTGACAATCTTGGTGAGAATCAGTTGTTCTGGGGCCAAAGGCCACTTCAAGTTTTGCTATTGCTGTTGGCTGTAATTGCAGTTCCATGGATGCTCCTTCCAAAACCTTTTATACTAAAGAAGCTTCATAATGAGAGATTTCAAGGACGCACTTATGGTGTGCTTAATACCGCTGAGGTGGATCTTGAGGTGGAACCAGATTCTGCCAGGCATCATCATGAGGAATTCAATTTCAGTGAGGTCTTTGTTCACCAAATGATTCACTCCATTGAGTTTGTTCTAGGTTCAGTTTCAAATACAGCATCCTATCTTCGACTTTGGGCATTAAGCTTGGCTCACTCAGAACTTTCTACTGTTTTTTACGAGAAAGTCTTGCTACTTGCTTGGGGGTATGACAATCTTGTCATTCGGTTAGTGGGGCTAGCTGTTTTTGCCTTTGCAACTGCCTTTATACTTCTTATGATGGAGACTCTCAGCGCTTTTCTTCACGCCCTGCGACTTCACTGGGTAGAATTTCAAAATAAATTCTACCATGGTGATGGCTACAAGTTCAGACCTTTTTCCTTTGCCTCCTTAACAGAGGATGAAAATTAA 2448 0.413 MKQFIENLPSMDLMRSEKMTFVQLIIPAESAQRAISYLGELGLLQFRDLNAEKSPFQRTFVNQVKRCAEMSRKLRFFKDQINKASLMSSLSVLQPDIYLEDLETQLAEHEHELIEMNSNSEKLQQSYNELLEFKIVLQKACGFLVSSPGHAVSEERELEENVYSNGDYVETPLQETRPGPSNQSGLRFISGIICKSKVLRFERMLFRATRGNMLFNQAPADEQIMDPISTEMVEKTVFVVFFSGEQARTKILKICEAFGANCYPVPEDISKQRQITREVSSRLDDLEATLDAGIRHRNKALASLGGHLAKWMDMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPMFAKVQIQEALQRATFDSNSQVGIIFHSMDALESPPTYFRTNYFTSPYQEIVDAYGVARYQEANPAVYTTIIFPFLFAVMFGDWGHGICLLLGALVLIARESKLSTRRLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFSVPFHIFGASAYKCRDSSCRDAHTVGLVKYREPYPFGVDPSWRGSRSELPFLNSLKMKMSILLGVVHMNLGIILSYFNARFFGNSLDIRYQFVPQIIFLNSLFGYLSLLIVLKWCTGSQADLYHVMIYMFLSPFDNLGENQLFWGQRPLQVLLLLLAVIAVPWMLLPKPFILKKLHNERFQGRTYGVLNTAEVDLEVEPDSARHHHEEFNFSEVFVHQMIHSIEFVLGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLVIRLVGLAVFAFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFASLTEDEN 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2344g00014 815 PIRSF ATP6V0A1 9 815 IPR026028 GO:0000220|GO:0046961
Gabi2344g00014 815 Coils Coil 99 126 - -
Gabi2344g00014 815 PANTHER VACUOLAR PROTON ATPASES 13 813 IPR002490 GO:0033179|GO:0046961|GO:1902600
Gabi2344g00014 815 Pfam V-type ATPase 116kDa subunit family 37 807 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2344g00014 Gabi-Chr2344 195868 208489 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2344g00014 1 808 Primary Pumps ATPases(2) AT2G28520 80.245 0.0 1346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2344g00014 K02154 - gmx:100786845 1506.12