Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2344g00012 ATGTCTTACCCAACCGTGAGCCCCGATTACCATAAGGCCGTTGAGAAGGCAAAGAGGAAGCTTAGGGGCTTCATCGCTGAGAAGAACTGTGCTCCTCTGATGCTCCGTTTAGCGTGGCACTCTGCTGGGACCTATGACGCGAAGACGAAGACCGGAGGTCCCTTCGGAACCATTAAGCATCCATCTGAACTTGCTCACGGTGCTAACAACGGGCTTGATATCGCTGTTAGGCTGTTGGAGCCAATTAAGGAGCAATTCCCCATCATAAGCTACGCTGATTTCTACCAGCTGGCTGGCGTCGTTGCTGTCGAGGTCACTGGTGGACCTGAAATTCCCTTCCACCCCGGAAGAGAGGACAAGCCTGAGCCACCTCCTGAGGGTCGCTTGCCTGATGCAACAAAGGGTTCTGACCATCTGAGGGATGTGTTTGGCAAAGCAATGGGGCTTAGCGACCAGGATATTGTTGCTCTATCTGGTGGTCACACCCTTGGAGCGGCACACAAGGAGCGTTCTGGATTTGAGGGCCCCTGGACTAGTAATCCCCTCATTTTTGACAACTCTTACTTCACGGAGCTTTTGTCTGGGGAGAAGGAAGGCCTCCTTCAGCTGCCAAGTGACAAGGCACTTTTGACCGACCCAGTATTCCGCCCTCTTGTTGAGAAATATGCTGCGGATGAAGATGCCTTCTTTGCTGATTATGCTGAGGCTCACCTAAAGCTCTCTGAGCTTGGGTTTCCTTAA 741 0.5236 MSYPTVSPDYHKAVEKAKRKLRGFIAEKNCAPLMLRLAWHSAGTYDAKTKTGGPFGTIKHPSELAHGANNGLDIAVRLLEPIKEQFPIISYADFYQLAGVVAVEVTGGPEIPFHPGREDKPEPPPEGRLPDATKGSDHLRDVFGKAMGLSDQDIVALSGGHTLGAAHKERSGFEGPWTSNPLIFDNSYFTELLSGEKEGLLQLPSDKALLTDPVFRPLVEKYAADEDAFFADYAEAHLKLSELGFP 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2344g00012 246 Gene3D - 17 244 - -
Gabi2344g00012 246 ProSitePatterns Peroxidases active site signature. 31 42 IPR019794 GO:0004601
Gabi2344g00012 246 MobiDBLite consensus disorder prediction 111 135 - -
Gabi2344g00012 246 FunFam L-ascorbate peroxidase, cytosolic 130 237 - -
Gabi2344g00012 246 PRINTS Haem peroxidase superfamily signature 107 119 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2344g00012 246 PRINTS Haem peroxidase superfamily signature 153 168 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2344g00012 246 PRINTS Haem peroxidase superfamily signature 31 45 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2344g00012 246 PRINTS Haem peroxidase superfamily signature 89 106 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2344g00012 246 PRINTS Haem peroxidase superfamily signature 177 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2344g00012 246 FunFam Cytosolic ascorbate peroxidase 17 136 - -
Gabi2344g00012 246 CDD ascorbate_peroxidase 3 246 - -
Gabi2344g00012 246 MobiDBLite consensus disorder prediction 113 135 - -
Gabi2344g00012 246 PRINTS Plant ascorbate peroxidase signature 31 46 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gabi2344g00012 246 PRINTS Plant ascorbate peroxidase signature 169 193 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gabi2344g00012 246 PRINTS Plant ascorbate peroxidase signature 63 87 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gabi2344g00012 246 PRINTS Plant ascorbate peroxidase signature 10 30 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gabi2344g00012 246 PRINTS Plant ascorbate peroxidase signature 147 168 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gabi2344g00012 246 PRINTS Plant ascorbate peroxidase signature 49 59 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gabi2344g00012 246 PRINTS Plant ascorbate peroxidase signature 88 106 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gabi2344g00012 246 PRINTS Plant ascorbate peroxidase signature 221 245 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gabi2344g00012 246 PRINTS Plant ascorbate peroxidase signature 107 119 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gabi2344g00012 246 PRINTS Plant ascorbate peroxidase signature 128 145 IPR002207 GO:0004601|GO:0006979|GO:0020037
Gabi2344g00012 246 ProSiteProfiles Plant heme peroxidase family profile. 72 246 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2344g00012 246 ProSitePatterns Peroxidases proximal heme-ligand signature. 153 163 IPR019793 -
Gabi2344g00012 246 SUPERFAMILY Heme-dependent peroxidases 3 244 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi2344g00012 246 Pfam Peroxidase 25 225 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2344g00012 246 Gene3D Peroxidase, domain 2 130 237 - -
Gabi2344g00012 246 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 10 244 IPR044831 GO:0004601|GO:0034599
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2344g00012 Gabi-Chr2344 166754 169182 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2344g00012 3 244 Peroxidase AT4G17690 28.873 1.81e-19 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2344g00012 K00434 - gmx:606508 465.307