Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi2344g00002 | ATGTTAGATCTTAATCTCAATGCGGACTCGACCGATTCGACTCAGAACGGCGACTCGCCGGTGCTGCTGGGGAATTTTCCAGAAGGTTCATGGAATCAAATGGCGGAGTCGGGGACCTCGAATTCCTCCGTCGTCAATGCGGACGGGTCCAGCAACTGTGGAGGCGACGAGGACTCGTGCTCGACGCGCGTCGACGACGTGTTTACATTCAATTTCGATATCCTTAAAGTGGAAGGAGGGAACGGCGTCGTAACGAAGGAGCTGTTCCCCGTGATTGGAGGAGGTAAAGGAGAGGACGAGGGCGGGTCAGGGAATTGGCAAGGGCAGGCTACGTCGTCGTTTCCACCGAGGAATGGGTTGGTTGATCTCTTGTACGATCGCCAGGGCGGGAACGGCGAGGTGAAGAAGGTTCAAGTTCAGGTTCAGCAACGAGCGAAGAAAAGTAGGAGGGGACCAAGGTCTCGGAGCTCGCAATACAGAGGGGTCACCTTCTACAGGAGGACCGGAAGATGGGAATCGCATATCTGGGATTGCGGGAAACAAGTCTATTTGGGTGGATTTGACACAGCTCATGCTGCTGCTAGAGCCTATGATCGAGCTGCTATTAAGTTCAGGGGAGTTGATGCTGACATCAATTTCAATCTGAGTGATTATGAGGATGATCTTAAACAGATGAAGAATTTATCCAAGGAGGAATTTGTACACATACTCCGTCGCCATAGTACTGGTTTCTCAAGGGGGAGTTCAAAATACCGAGGAGTTACACTCCACAAATGTGGCCGTTGGGAAGCTCGAATGGGGCAATTCCTTGGCAAAAAGTATATATATCTTGGGTTATTCGACAGCGAAGTAGAAGCTGCAAGGGCTTATGACAAGGCAGCTATCAAATGCAGTGGAAGGGAAGCAGTGACTAACTTTGAGCCAAGTTCATACCAAGGAGAGATGAAACCTGCAGCCATTAATGAAGCAGGTGGCAGTCACAATCTTGACCTCAATTTGGGCATAGCGACTCCAGGACCTGGTCCCAAAGAAAATTGGGGGCAACTTCAGTTCCCCTCCGTACCTTACAACATGCACGCAGGAACAAATTCAATGATGGAAACAAATGTTAATTCTAGAACTGGAAATCCATCTTTGAAAAGGCTGGTTGTAACTGAAGAGCGACCTTTTGTATGGAATGGCATGTCTACTAGTTTCTTTCCCAGTGAGCAGGAAAAAGCAGATAGAATCAGCATAGATCCATCAAAAGGACTCCCCGATTGGGCGTGGCAAACGCATGGCCAGGTCACTGCTACCCCAGTACCACAGTTCTCTGCTGCAGCATCATCAGGATTCTCAATTTCAGCTACCTTTCCATCGACTTCCATCTTTCCGACAAGATCTATGAACTCAATTCCCCAGAGTCTCTGTTTTACTTCATCCAGCGCACCTAGCAGCAACACATCTCAATATTATTACCAGGTTAAGCCCCCGCAGGCACCACCCTAG | 1488 | 0.4906 | MLDLNLNADSTDSTQNGDSPVLLGNFPEGSWNQMAESGTSNSSVVNADGSSNCGGDEDSCSTRVDDVFTFNFDILKVEGGNGVVTKELFPVIGGGKGEDEGGSGNWQGQATSSFPPRNGLVDLLYDRQGGNGEVKKVQVQVQQRAKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNLSDYEDDLKQMKNLSKEEFVHILRRHSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARAYDKAAIKCSGREAVTNFEPSSYQGEMKPAAINEAGGSHNLDLNLGIATPGPGPKENWGQLQFPSVPYNMHAGTNSMMETNVNSRTGNPSLKRLVVTEERPFVWNGMSTSFFPSEQEKADRISIDPSKGLPDWAWQTHGQVTATPVPQFSAAASSGFSISATFPSTSIFPTRSMNSIPQSLCFTSSSAPSSNTSQYYYQVKPPQAPP | 495 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi2344g00002 | 495 | SUPERFAMILY | DNA-binding domain | 157 | 215 | IPR016177 | GO:0003677 | |
Gabi2344g00002 | 495 | SUPERFAMILY | DNA-binding domain | 249 | 308 | IPR016177 | GO:0003677 | |
Gabi2344g00002 | 495 | MobiDBLite | consensus disorder prediction | 472 | 488 | - | - | |
Gabi2344g00002 | 495 | FunFam | AP2-like ethylene-responsive transcription factor | 157 | 216 | - | - | |
Gabi2344g00002 | 495 | PRINTS | Ethylene responsive element binding protein signature | 289 | 309 | IPR001471 | GO:0003700|GO:0006355 | |
Gabi2344g00002 | 495 | PRINTS | Ethylene responsive element binding protein signature | 251 | 262 | IPR001471 | GO:0003700|GO:0006355 | |
Gabi2344g00002 | 495 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 128 | 345 | - | - | |
Gabi2344g00002 | 495 | MobiDBLite | consensus disorder prediction | 136 | 159 | - | - | |
Gabi2344g00002 | 495 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Gabi2344g00002 | 495 | SMART | rav1_2 | 158 | 220 | IPR001471 | GO:0003700|GO:0006355 | |
Gabi2344g00002 | 495 | SMART | rav1_2 | 250 | 313 | IPR001471 | GO:0003700|GO:0006355 | |
Gabi2344g00002 | 495 | ProSiteProfiles | AP2/ERF domain profile. | 250 | 307 | IPR001471 | GO:0003700|GO:0006355 | |
Gabi2344g00002 | 495 | ProSiteProfiles | AP2/ERF domain profile. | 158 | 214 | IPR001471 | GO:0003700|GO:0006355 | |
Gabi2344g00002 | 495 | MobiDBLite | consensus disorder prediction | 472 | 495 | - | - | |
Gabi2344g00002 | 495 | MobiDBLite | consensus disorder prediction | 1 | 50 | - | - | |
Gabi2344g00002 | 495 | CDD | AP2 | 158 | 216 | IPR001471 | GO:0003700|GO:0006355 | |
Gabi2344g00002 | 495 | CDD | AP2 | 249 | 309 | IPR001471 | GO:0003700|GO:0006355 | |
Gabi2344g00002 | 495 | FunFam | AP2-like ethylene-responsive transcription factor | 249 | 309 | - | - | |
Gabi2344g00002 | 495 | Pfam | AP2 domain | 249 | 296 | IPR001471 | GO:0003700|GO:0006355 | |
Gabi2344g00002 | 495 | Pfam | AP2 domain | 158 | 206 | IPR001471 | GO:0003700|GO:0006355 | |
Gabi2344g00002 | 495 | Gene3D | AP2/ERF domain | 157 | 215 | IPR036955 | GO:0003700|GO:0006355 | |
Gabi2344g00002 | 495 | Gene3D | AP2/ERF domain | 249 | 308 | IPR036955 | GO:0003700|GO:0006355 | |
Gabi2344g00002 | 495 | MobiDBLite | consensus disorder prediction | 30 | 50 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi2344g00002 | Gabi-Chr2344 | 78494 | 82551 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi2344g00002 | 1 | 495 | AP2-EREBP Transcription Factor Family | AT5G60120 | 43.264 | 2.11e-98 | 303 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-AP2 | Gabi2344g00002 | AP2 | 4.3e-09 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi2344g00002 | K09284 | - | gmx:100788303 | 736.102 |