Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2342g00026 ATGACTCTGGAGAATTATTTGATAGATGAAGATGGGGCTGGAGACCATTTTCCAGTGGGTATGCGTGTTTTGCTTGTTGACGATGATCAACTTTGTCTCGAAGTGTTAGGGAACATGCTTCGCAAATGCCAGTATCAAGTTACTACAACTATTCAGTCAATTGAGGCATTAGATATGTTGAGGACAAATAGAAATATGTTTGACCTCGTTATTACCGACGTAAATATGCCACACATGGATGGACTTAAGCTACTAGAGATAGTGGGACATGAAATGGACATACCTGTCATAATGTTGTCAGAATTGAGTGATATAGAGGTCGTGAAGAAAAGTGTTATACTTGGCGCATGTGACTATATAATTAAACCTCCTCGAATCCAAGTACTGCAGAATATATGGCAACATGTAGCGCGAAGAAAGATTGATTGCAAAGGTCAAAATACGCACTTCAATGAGGAGAAAGCATGCAATATAGCGGGGGAAGGTAGTCAAAGTATCACATTAGAAAGTAATGCTGACCATAATCAAATGCATGGTAAGAAAAGGAAGGAACCGTGTGTGGAAGAAGAAAATGGTGAAATGAATGCAAAAGAGAATGAGGAACCTTCAAATCAAAAGAAGCCTCGTTTAAAATGGAATGATGACTTGCAAACAAAATTTCTTGCTGCAGTCAATTCACTGGGCATTGATAGTGAGTTTACATGA 705 0.3872 MTLENYLIDEDGAGDHFPVGMRVLLVDDDQLCLEVLGNMLRKCQYQVTTTIQSIEALDMLRTNRNMFDLVITDVNMPHMDGLKLLEIVGHEMDIPVIMLSELSDIEVVKKSVILGACDYIIKPPRIQVLQNIWQHVARRKIDCKGQNTHFNEEKACNIAGEGSQSITLESNADHNQMHGKKRKEPCVEEENGEMNAKENEEPSNQKKPRLKWNDDLQTKFLAAVNSLGIDSEFT 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2342g00026 234 MobiDBLite consensus disorder prediction 170 211 - -
Gabi2342g00026 234 Gene3D - 206 233 - -
Gabi2342g00026 234 MobiDBLite consensus disorder prediction 174 211 - -
Gabi2342g00026 234 Gene3D - 21 205 - -
Gabi2342g00026 234 SUPERFAMILY CheY-like 20 141 IPR011006 -
Gabi2342g00026 234 ProSiteProfiles Response regulatory domain profile. 22 137 IPR001789 GO:0000160
Gabi2342g00026 234 SMART REC_2 21 133 IPR001789 GO:0000160
Gabi2342g00026 234 CDD REC_typeB_ARR-like 23 137 - -
Gabi2342g00026 234 PANTHER TWO-COMPONENT RESPONSE REGULATOR 21 227 IPR045279 GO:0009736
Gabi2342g00026 234 Pfam Response regulator receiver domain 23 130 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2342g00026 Gabi-Chr2342 329220 330740 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2342g00026 15 230 Response Regulator Gene Family AT4G31920 50.926 4.69e-61 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gabi2342g00026 Response_reg 5.7e-23 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2342g00026 - K14491 gmx:100803040 271.166