Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2342g00015 ATGCAATTCAAGGTCGGCAAGCGCGTGATCCGGGTCACCAGATGTATCTTCCGGAGGTTCAGGACCCGACCCGGATACCGGAGTCTTGGTTCTTCGCCGGCGAGGAACCCCATGACGAAGATTCTTACGTGGGGTCGAAAGTTGATGAAAGGGTCGAGATCCCTCTGCTCCGCCGCGAAAAAGGGGTCGGGTTACATCCCGGTTGGATCCGACCCGGTTCAGGACAGTTCCCCGGCGGTGCCGAGGGGGCACTTGGCGGTTTACGTGGGGCAGAAGGACGGTGAGTTTCACCGGGTTCTGGTGCCGGTGATTTACTTCAACCACCCTTTGTTCAGCGAGTTGTTGAGGGAAGCGGAGAAGGAGTACGGGTTTCAGCACCCGGGTGGGATCACGATCCCTTGCCGGTACACGGAGTTTGAACGGGTCAAGACCCGAATTGCATCCGGGTCGGGTGTCCGCCGCAGCAGCCGGATATTGTCGTGGCGGCGACATTGTTGA 498 0.5924 MQFKVGKRVIRVTRCIFRRFRTRPGYRSLGSSPARNPMTKILTWGRKLMKGSRSLCSAAKKGSGYIPVGSDPVQDSSPAVPRGHLAVYVGQKDGEFHRVLVPVIYFNHPLFSELLREAEKEYGFQHPGGITIPCRYTEFERVKTRIASGSGVRRSSRILSWRRHC 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2342g00015 165 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 60 141 IPR003676 GO:0009733
Gabi2342g00015 165 Pfam Auxin responsive protein 60 143 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2342g00015 Gabi-Chr2342 116058 117159 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2342g00015 78 139 Calmodulin-binding Proteins AT3G43120 50.000 6.64e-16 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2342g00015 K14488 - gmx:100808164 237.654