Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2333g00031 ATGGAACCTCTATGTGAGTTTTGTGGGGTTGTAAGAGCTGTGGTTTACTGCAAATCAGATTCTGCTCGTCTCTGCTTGCATTGCGATGGTTGTGTACACAATGCTAATGCTTTGTCCCGTAGGCATTCACGTTCTCTCCTCTGTGATAAGTGTAATTCCCAGCCAGCAATTGTCCGTTACATGGATCATAAATTGTCTATATGTCAAGGTTGTGACTGGAATCCAAATGAATGTTCAGTATTGGCACATAGGCGTGTGGCATTGAATTGTTATACTGGCTGTCCCTCTTTGGCTGAATTTTCTAGGATTTGGTCCTTTGTGTTTGATGCTAATTCCTCATGTGGTGGTTGGGAATCACTTAGTACATTGCCTAAAAATGAGAGCTGCACTAGCAAGTGTCTGGAGCAACCTGATAATGACGGTTCCTTAGGTTTGGCTAATGACAAGTTGGATGAAATAGAATCATGTGTCAGATATGAACCTTGGATGGGGCAATCTCCCATGATTCCACCATCAACTCCAAGTTACATGCCGTACTGCAAAGATCAAGCATTTTTCTTTCTTCAAGACTCAAATCAGCCAAAGGGATGTCCTAATATCAAGGATTTAGGAATTCATGATGCAAATGGTCTCTGTGAAGGTCTCAATGTGGATGATGTTCACTTAAACTTTGAAAATGCTGATGAAATATTTGACTGCTCTCAAGGTACCACAAGATACAACCTTGAAGATGGAGGAATGGACTGTCTATTAATGGATAAAAACATATCAGTCACAGAATCTAATGGTCTTATTGAGAGTGCCATGGAGGTTTTTCCTAAAATTCAATTTATTATTCTCCTTTCTAAAACTCCTTATGGATATAAGGCATCATCATCAGTCCATCAAGATTGTGTGGCTTTTCAGTCATCTGGGGCTGGTGGGTCAGCTAGTGTGATGCAGGCCATCAACAGTAATGCAAATTGTGCACTTATGAATCCTAGCTTCAACAGAAACATCAATCTTGGATTTCATCAGGGTCAAATGCATTCAAGCTTATCAATTCAATTATCCAACATTACTGGTGAAAATGGTGCTACTGAATATCAAGACTGTGGTTTATCATCAATGTTTCTGCCAGGTGAAACTCCCTGGGAACCAAATTTGGACGGTACATGCCCACAAGCAAGGGATAAAGCTAAAATGAGATACAAAGAGAAAAAGAAAACTCGAACGTTTGGTAAGCAAATAAGATATGCATCTCGCAAAGCAAGGGCTGATACAAGAAAACGTGTGAAAGGCAGATTTGTTAAAGCAGGTGAAGCATATGATTATGATCCTCTTGTGACAAGAGACATCTAA 1341 0.4004 MEPLCEFCGVVRAVVYCKSDSARLCLHCDGCVHNANALSRRHSRSLLCDKCNSQPAIVRYMDHKLSICQGCDWNPNECSVLAHRRVALNCYTGCPSLAEFSRIWSFVFDANSSCGGWESLSTLPKNESCTSKCLEQPDNDGSLGLANDKLDEIESCVRYEPWMGQSPMIPPSTPSYMPYCKDQAFFFLQDSNQPKGCPNIKDLGIHDANGLCEGLNVDDVHLNFENADEIFDCSQGTTRYNLEDGGMDCLLMDKNISVTESNGLIESAMEVFPKIQFIILLSKTPYGYKASSSVHQDCVAFQSSGAGGSASVMQAINSNANCALMNPSFNRNINLGFHQGQMHSSLSIQLSNITGENGATEYQDCGLSSMFLPGETPWEPNLDGTCPQARDKAKMRYKEKKKTRTFGKQIRYASRKARADTRKRVKGRFVKAGEAYDYDPLVTRDI 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2333g00031 446 Pfam CCT motif 390 432 IPR010402 GO:0005515
Gabi2333g00031 446 CDD Bbox1_BBX-like 4 47 - -
Gabi2333g00031 446 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 435 - -
Gabi2333g00031 446 SMART bboxneu5 1 47 IPR000315 GO:0008270
Gabi2333g00031 446 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Gabi2333g00031 446 ProSiteProfiles CCT domain profile. 390 432 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2333g00031 Gabi-Chr2333 265965 269644 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2333g00031 1 440 C2C2-CO-like Transcription Factor Family AT3G21880 40.724 2.54e-95 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gabi2333g00031 CCT 1.3e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2333g00031 - - gmx:100804738 694.501