Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2333g00022 ATGGAAATGGGAAGCCAGAGTTACTTCAGGGCTTTGATTCTTTGTCTTTTGGCATTAATTGCTTCAAATCATGCTCAACTGCAGCTGGGTTTTTATGCTAAGAGCTGTCCAAAAGCTGAGCAAATCATTTTAAACTTTGTTCATGAGCATATCCACAATGCTCCATCACTTGCAGCTGCCATAATAAGAATGCAATTCCATGACTGTTTTGTTAGGGGATGTGATGGTTCAGTCCTTCTGAACTCAACAACAAATCAAGCTGAAAAGAATGCTCCTCCAAATCTTACAGTCAGAGGCTTTGACTTCATTGACAGAGTAAAGAGCCTTGTTGAAGCTGAATGCCCTGGTGTAGTTTCTTGTGCTGATATAATAGCTTTGGTTTCAAGAGACTCTATTGTAGCCACAGGTGGACCCTTTTGGAAAGTTCCAACAGGTAGAAGGGATGGGGTCATATCTAATTTAGTAGAAGCCAGAAGCAGCATTCCTGCACCATTTCACAACTTCACCACCGTCCAAACACTATTTGGCAATCAGGGACTTGATTTAAAAGACTTGGTCCTGCTTTCTGGTGCTCACACAATTGGTGTATCACATTGCTCATCATTCTCAAGCCGCCTATTCAATTTTACTGGCAAGGGTGATCAAGATCCAGCACTTGATAGTGAATATGCAAAAAATCTTAAGACCTTCAAGTGCAAGAACATCAATGATAACACCACAAAAGTTGAGATGGACCCTGGAAGTCGCAAGACATTTGATCTTGGCTACTATGGTCAAGTGGTTAAGAGAAGGGGTCTATTTGTGTCAGATGCTTCATTGTTGACTAACACTGTTACAAAGTCAATGGTCACTGAACTTCTTCATGGGTCACTTGAAAATTTCTATGCTGAATTTGCCAACTCAATGGAGAAAATGGGACGAATTAAAGTCAAGACCGGGACAGAAGGAGAGATCAGGAAGCATTGTGCACTTGTAAATAGTTAA 984 0.4096 MEMGSQSYFRALILCLLALIASNHAQLQLGFYAKSCPKAEQIILNFVHEHIHNAPSLAAAIIRMQFHDCFVRGCDGSVLLNSTTNQAEKNAPPNLTVRGFDFIDRVKSLVEAECPGVVSCADIIALVSRDSIVATGGPFWKVPTGRRDGVISNLVEARSSIPAPFHNFTTVQTLFGNQGLDLKDLVLLSGAHTIGVSHCSSFSSRLFNFTGKGDQDPALDSEYAKNLKTFKCKNINDNTTKVEMDPGSRKTFDLGYYGQVVKRRGLFVSDASLLTNTVTKSMVTELLHGSLENFYAEFANSMEKMGRIKVKTGTEGEIRKHCALVNS 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2333g00022 327 Gene3D Peroxidase, domain 2 162 305 - -
Gabi2333g00022 327 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Gabi2333g00022 327 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2333g00022 327 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2333g00022 327 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2333g00022 327 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2333g00022 327 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2333g00022 327 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2333g00022 327 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2333g00022 327 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2333g00022 327 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2333g00022 327 PANTHER PEROXIDASE 25-RELATED 16 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2333g00022 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Gabi2333g00022 327 Pfam Peroxidase 45 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2333g00022 327 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2333g00022 327 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2333g00022 327 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2333g00022 327 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2333g00022 327 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2333g00022 327 SUPERFAMILY Heme-dependent peroxidases 26 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi2333g00022 327 Gene3D - 30 326 - -
Gabi2333g00022 327 FunFam Peroxidase 30 179 - -
Gabi2333g00022 327 ProSiteProfiles Plant heme peroxidase family profile. 26 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2333g00022 327 CDD secretory_peroxidase 26 325 IPR033905 GO:0004601|GO:0042744
Gabi2333g00022 327 FunFam Peroxidase 162 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2333g00022 Gabi-Chr2333 229394 230698 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2333g00022 12 326 Peroxidase AT4G11290 68.454 2.59e-165 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2333g00022 K00430 - gmx:100803114 559.296