Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2333g00009 ATGCTAGCCGGTGTACATGTAATGATTCCGGCGAGAAACATGCCATCGATGATTGGAAGCGTTGGTGGGTTTGGATTATCTTCAGGGCTCTCTCTTGGCCAGCCAAACCTAATGGAAGCTGGTCAGCTCCACCCATTGGACATGCCTCAGAACACTTCAGAGAGCGATGTCCCTAGAATCCGCGACGATGACTTTGACAGTGCCACCAAGTCCGGTAGTGAAAACCATGAAGGTGCCTCCGGCGAAGACCAAGATCCTCGCCCCAAGAAGAAGCGCTACCACCGTCACACACAGCACCAGATCCAGGAAATGGAAGCTTTCTTTAAGGAGTGTCCTCACCCTGATGACAAGCAAAGGAAGGAACTGAGCAGAGAGTTAGGGTTAGAACCATTACAGGTCAAGTTTTGGTTCCAGAACAAGCGTACTCAGATGAAGACACAACATGAGCGACATGAGAATACACAACTTAGAACCGAAAATGAGAAGCTTCGAGCTGATAACATGAGGTATAGGGAAGCTCTTAGCAACGCTTCATGTCCTAACTGTGGTGGACCAACCGCTATAGGAGAAATGTCATTTGATGAACATCACCTTAGGCTCGAAAATGCTCGACTAAGAGAAGAGATTGATAGGATTTCTGCTATTGCTGCTAAGTATGTGGGGAAGCCAGTGGTGAGTTATCCACTTCTTTCCCCTTCATCTGTTCCTCCACGTCCTTTAGAACTTGGGATTGGAAGTTTTGGTGGTCAACAAGGCATTGGTGAGGATATGTTTGGAGCTGGAGATCTTCTTAGGTCAATAACTGGACCCTCTGAAGCTGATAAACCAATAATAATAGAGCTAGCTGTTGCTGCTATGGAAGAGCTCATAGGAATGGCACAAATGGGTGAGCCTCTTTGGTTGACTACACTGGATGGAACCACCACAGTTCTCAACGAGGATGAATATATTAGGTCCTTTCCTCGAGGAATTGGTCCAAAACCTGCTGGCTTTAAGTGTGAAGCTTCACGAGAAATCGCTGTTGTTATCATGAACCATGTTAACCTTGTTGAGATTCTCATGGATGTGAACCAATGGTCCACAGTTTTCTCTGGTATCGTCTCAAGAGCAATGACATTAGAAGTGCTATCAACAGGAGTGGCGGGGAACTACAACGGTGCCTTGCAAGTGATGACGGCTGAATTACAAGTACCTTCACCTCTTGTGCCAACTCGTGAGAGTTATTTCGTAAGGTATTGTAAGCAGCACGCAGACGGAACTTGGGCAGTGGTTGATGTGTCTTTGGATAATTTGCGCCCTAGTCCTTCGGCAAGATGTAGAAGAAGGCCTTCTGGTTGCTTAATTCAAGAAATGCCTAATGGCTACTCAAAGGTCATTTGGGTTGAGCATGTAGAAGTGGATGATAGAGGGGTTCATAATCTATACAAGCAGCTTGTTAGCTCTGGACAAGCATTTGGTGCAAAACGTTGGATTGCAACCTTAGATAGACAATGTGAAAGGCTTGCTAGTGCAATGGCAACAAACATTCCCACCTTAGATGTTGGAGTGATAACAAACCAAGATGGGAGGAAGAGTATGTTGAAACTGGCTGAGAGAATGGTTATAAGCTTTTGTGCTGGAGTGAGTGCTTCTACTGCTCACACATGGACAACACTATCTGGGACTGGTGCTGATGATGTAAGGGTCATGACTCGTAAGAGTATAGATGACCCTGGAAGGCCTCCTGGTATTGTTCTCAGTGCTGCAACTTCTTTTTGGCTTCCAGTGCCACCCAAAAGAGTTTTTGAATTTCTCCGTGATGAGAACTCCAGAAGTGAGTGGGATATTCTTTCCAACGGTGGAGTTATCCAAGAAATGGCACATATTGCTAATGGAAGAGATACCGGAAATTGTGTCTCTCTACTTCGGGTGAATAGTGCAAATTCAAGCCAGAGCAACATGTTGATATTACAAGAGAGTTGCACCGACTCAACGGGCTCTTTTGTTATATATGCTCCTGTTGATATTGTTGCAATGAATGTAGTTCTAAATGGAGGAGACCCAGATTATGTAGCTCTTCTTCCTTCAGGATTTGCTATACTCCCAGATGGGACCACAACACATGGTGGTGGCCTTGGTGAAACTGGTCATCATGGTGGATCTCTCTTGACTGTTGCATTTCAAATATTGGTTGATTCAGTTCCAACTGCAAAGTTGTCTCTTGGATCTGTTGCTACTGTTAATAATCTTATTGCATGCACTGTTGAGAGAATTAAGGCTTCTTTATCAGGTGAAACTACTTGA 2283 0.449 MLAGVHVMIPARNMPSMIGSVGGFGLSSGLSLGQPNLMEAGQLHPLDMPQNTSESDVPRIRDDDFDSATKSGSENHEGASGEDQDPRPKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVSYPLLSPSSVPPRPLELGIGSFGGQQGIGEDMFGAGDLLRSITGPSEADKPIIIELAVAAMEELIGMAQMGEPLWLTTLDGTTTVLNEDEYIRSFPRGIGPKPAGFKCEASREIAVVIMNHVNLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAELQVPSPLVPTRESYFVRYCKQHADGTWAVVDVSLDNLRPSPSARCRRRPSGCLIQEMPNGYSKVIWVEHVEVDDRGVHNLYKQLVSSGQAFGAKRWIATLDRQCERLASAMATNIPTLDVGVITNQDGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSIDDPGRPPGIVLSAATSFWLPVPPKRVFEFLRDENSRSEWDILSNGGVIQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESCTDSTGSFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTTTHGGGLGETGHHGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSGETT 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2333g00009 760 FunFam Homeobox-leucine zipper protein GLABRA 2 280 499 - -
Gabi2333g00009 760 Coils Coil 153 173 - -
Gabi2333g00009 760 SMART HOX_1 88 151 IPR001356 GO:0003677
Gabi2333g00009 760 MobiDBLite consensus disorder prediction 42 98 - -
Gabi2333g00009 760 ProSiteProfiles 'Homeobox' domain profile. 87 147 IPR001356 GO:0003677
Gabi2333g00009 760 MobiDBLite consensus disorder prediction 56 89 - -
Gabi2333g00009 760 CDD START_ArGLABRA2_like 275 499 - -
Gabi2333g00009 760 ProSiteProfiles START domain profile. 271 503 IPR002913 GO:0008289
Gabi2333g00009 760 SUPERFAMILY Bet v1-like 273 502 - -
Gabi2333g00009 760 ProSitePatterns 'Homeobox' domain signature. 122 145 IPR017970 GO:0000981|GO:0006355
Gabi2333g00009 760 SUPERFAMILY Homeodomain-like 77 147 IPR009057 -
Gabi2333g00009 760 FunFam Homeobox-leucine zipper protein HDG1 75 163 - -
Gabi2333g00009 760 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 87 755 IPR042160 -
Gabi2333g00009 760 SMART START_1 280 500 IPR002913 GO:0008289
Gabi2333g00009 760 Pfam START domain 281 500 IPR002913 GO:0008289
Gabi2333g00009 760 Gene3D - 333 498 IPR023393 -
Gabi2333g00009 760 CDD homeodomain 90 148 IPR001356 GO:0003677
Gabi2333g00009 760 SUPERFAMILY Bet v1-like 520 752 - -
Gabi2333g00009 760 Gene3D - 75 164 - -
Gabi2333g00009 760 Pfam Homeodomain 90 145 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2333g00009 Gabi-Chr2333 67399 74815 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2333g00009 60 759 Homeobox Transcription Factor Family AT1G05230 81.650 0.0 1160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Gabi2333g00009 START 1.3e-58 CL0209