Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2330g00001 ATGACCCTCTTTTCTTTATCAAACTCTAAATGCTTTTGGGGAACTTCAATTGCATTAGCATTCTACTTGAGTTTTCTCTACATTGTAAACTCAAGTACCCTTCAAACCCCATCTCCAAATCCATGCAAGGATCCTTACAAGCAACTCAGGCTCATCCTTAACCCAAATGGAACAGTCACACGATCAAACAAACCCCCAGAGAGCCCTCCCGCACCTGATCCCAACCTCAACATCCTCGTACTCTCCAAGGACCTCACCATCAACCAATCAAAAGGCACATGGGCCAGGATCTACCTACCCCGCAAAGCACTGGATCATAGCTCCAAGCTTCCCCTGGTGGTTTTCTTCCATGGGGGCGGGTTCATTTTCCTCAGTGCAGCCTCAACCATATTCCATGATTTCTGCTTCAACATGGCAAACGACGTCGTAGCTGTTGTTGCGTCCATAGAATACCGTCTTGCACCTGAACATAGACTTCCTGCAGCCTATGAAGATGCTATGGAGGCGCTGCACTGGATCACAACCAACCGAACAGATGATTGGGTGAGAAACTATGTTGATTATTATAATGTTTTTCTTATGGGTAGTAGTGCAGGAGGAAACATAGCGTACAACGCAGGTCTACGTGCAGCTTCGGGAGATGATCAAATTTCTAAGATCAGAGGGCTAATATTGGTTCAACCATTTTTTGGTGGGACCCTTAGGACCGCTTCAGAACTGAGGCTGGCGAATGAGCCTCATTTGTCACTGTGTACTAATGACATGTTGTGGGAGTTATCCTTACCCGTTGGAGTTGACCGCGATTATGAGTATTGCAATCCTACGGTGGGTGATGGTCCTGTGAGATTGGAAAAGATCAGACGGCTTGGGTGGTGGATACTGGTGACCGGCTGTGGCGGTGACCCACTTGTGGACCGTCAGATGGGACTTGTGAGGTTGATGGAGAAGAAGGGTGTGAGAGTTGTCGGACATTTCACAGAAGGAGATTATCATGGGGTTCAAGATGTTGATCCCCTGAAAGCAAAGCAATTATATGCAGTAATGAAAAGTTTTATTTCATCTTTGCCTTCTCGGGGTTGA 1080 0.4667 MTLFSLSNSKCFWGTSIALAFYLSFLYIVNSSTLQTPSPNPCKDPYKQLRLILNPNGTVTRSNKPPESPPAPDPNLNILVLSKDLTINQSKGTWARIYLPRKALDHSSKLPLVVFFHGGGFIFLSAASTIFHDFCFNMANDVVAVVASIEYRLAPEHRLPAAYEDAMEALHWITTNRTDDWVRNYVDYYNVFLMGSSAGGNIAYNAGLRAASGDDQISKIRGLILVQPFFGGTLRTASELRLANEPHLSLCTNDMLWELSLPVGVDRDYEYCNPTVGDGPVRLEKIRRLGWWILVTGCGGDPLVDRQMGLVRLMEKKGVRVVGHFTEGDYHGVQDVDPLKAKQLYAVMKSFISSLPSRG 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2330g00001 359 Gene3D alpha/beta hydrolase 46 355 IPR029058 -
Gabi2330g00001 359 PANTHER ARYLACETAMIDE DEACETYLASE 56 333 - -
Gabi2330g00001 359 Pfam alpha/beta hydrolase fold 113 333 IPR013094 GO:0016787
Gabi2330g00001 359 SUPERFAMILY alpha/beta-Hydrolases 45 352 IPR029058 -
Gabi2330g00001 359 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 113 129 IPR002168 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2330g00001 Gabi-Chr2330 10442 11521 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2330g00001 56 274 Carbohydrate Esterase AT1G68620 41.964 2.32e-51 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2330g00001 - - gmx:100792597 569.311