Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2329g00001 ATGTTGGGTAATGGGCAACCTGTGGATTTGTATAAGCTCTTCATGTTGGTGAAGGAGAAAGGTGGCTATGATGTTGTTTGTAAGAATGGGTTGTGGGATTTGGTGGGGGAAGAATATGGGTTGGGTGTGAAGGATGGTTCCTATGTTAAAGGGGTTTATAGTAAGCACTTAAGGACTCTAGAGGCAAGGCTCAAGAATGTTGCTGGCAGTAAGTTCACTGAGTGTGGTTTAGTGGATGATAGAGTTAAATTTGGTAAGCGTTTGATGGAGTTGCAATCTGAATTTTTGTTGGATGATTATGTTGAGGAAGAGGGTGGGGACAAACTCAATAGTGTATATGACTATCAAGATGGGAGGAAATTATGTGGTAGTAATAGAGTGAAGGGCATGAATCCAGAGTCAAATGTGGATGAACTCGATAGGGTATATGACTATCTAGATGGGAGGAAGTTGTGTGGTACTAATAGAGTGAAGGGAATGAATCCAGAGTTTAATGGGGCCAAGAAAGTTAAGACTGAAGGACTTGTTGATTTGAATATGGTGGATCATAAGGCGAATGAGCCTGATCTTGGACACTTGTGCAACCATAATGCCGCAATGGATATACTGGAAGAGTTTGATGGAGGCAAAATATTAGCAGTTGATGAATCTGATGCAGTAAAAAACGTGCATGGATTGTCTGATGGAGGGAAGAGGTGTGATGATGATGACAATGACAATGATGATGATGATGACAATGACAATGATGATGATATCTTGATATTAGATCCATCCATTGTTAATAAAGAGAGCTTTGGTTGTAAGAAGAGAGTGTCTATGTGGAATGTATCTGATGCAGTAAACAACATGCCTGGATTGTCTGATGGAGGCAAGAGGTGTGATGATGATGATGACGACAATGATGATTATGACGGCGATAACTATGACAATGACAGTGACATCATGATATTGGATCCATCCAGTATTGATAAAGAGAGTTTTGGTTGTAAGAAGAAGTGTCAGTCTATGCAGTACATGCTAAGCTGGGTTAAGGGCATTGCAGAGAACCTTTGTGATCCTGTAGTTGGTTCAATTCCTGAAAAGTCAAAGGGGAAGTTTTACAGTAGTCAGGAGATCTGGAAGCAGGTTTTGTTGTTTAGAGAAGCTGTCTTTCTGAAGAAAAGTTTTGAATCAAGCAATGAACAACTTACTTGGAAGGGTCAGAAGATGCATCCTTCCTTGTACGATGATGGTCACCAAGGCTTAACCTACAATCTTAGAAAGAGGTTGAAACGTGACAAGAGGCATTTAGTTGGAAAATCTTCAACTAATGGAGTCTCTTCAGGAACACAGAGAGGTTTGGAGAGAATCCAAAGTCCTCATACTGAAGTTTGTGCTGTGAAAAAGTTACTTGATTCATGTACTGCACGCTCAAGTCTTGATAGAAGTGCCACAGTGCCTATCCCTTTGGGGCCAGCCCACCAAGCTGAAGTGCCACAATGGACTGGCATGACTTATGAGAGTGATTCTAAGTGGTTGGGGACTCGAATATGGCCAACAGAAAATGTAAATTCCAAACATTTTTTTGAAAGGGACCCCATTGGAAAGGGAAGAGAAGATTCATGTGGCTGCCAAGTACAAGGTTCTGTTGAGTGTGTGCGGTTCCACATTGTTCATAAAAGAACTAAACTGAAGTTGGAATTGGGTGAGGCTTTTTACAAGTGGAATTTACATAAGGTAGGTGAAGAAGTTAGGCGTTTGTGGACACGGGAAGAAGAGAAGAAGTTCAAAGATGTGGTGAAATCAAACCCTCCTTCACTTGAAAGATGTTTCTGGGATCATATTTTTAAAGCATTTCCCATGAAGAGCAGGGAAGATTTAGTTAGCTACTACTTCAATGTCTTTATTTTGCAGCGCAGAGGATACCAGAATAGGCATACTCCAAATGACATTGACAGTGATGATGATGGATCTGAATTTGGACCATTGAGGAAGGTTTTTGGACATAAATCACGTAGCTCCACCTTATTACCCCCCAAAAGCCAGAGACAGAGGGAAGATAGAAAGTGA 2049 0.41 MLGNGQPVDLYKLFMLVKEKGGYDVVCKNGLWDLVGEEYGLGVKDGSYVKGVYSKHLRTLEARLKNVAGSKFTECGLVDDRVKFGKRLMELQSEFLLDDYVEEEGGDKLNSVYDYQDGRKLCGSNRVKGMNPESNVDELDRVYDYLDGRKLCGTNRVKGMNPEFNGAKKVKTEGLVDLNMVDHKANEPDLGHLCNHNAAMDILEEFDGGKILAVDESDAVKNVHGLSDGGKRCDDDDNDNDDDDDNDNDDDILILDPSIVNKESFGCKKRVSMWNVSDAVNNMPGLSDGGKRCDDDDDDNDDYDGDNYDNDSDIMILDPSSIDKESFGCKKKCQSMQYMLSWVKGIAENLCDPVVGSIPEKSKGKFYSSQEIWKQVLLFREAVFLKKSFESSNEQLTWKGQKMHPSLYDDGHQGLTYNLRKRLKRDKRHLVGKSSTNGVSSGTQRGLERIQSPHTEVCAVKKLLDSCTARSSLDRSATVPIPLGPAHQAEVPQWTGMTYESDSKWLGTRIWPTENVNSKHFFERDPIGKGREDSCGCQVQGSVECVRFHIVHKRTKLKLELGEAFYKWNLHKVGEEVRRLWTREEEKKFKDVVKSNPPSLERCFWDHIFKAFPMKSREDLVSYYFNVFILQRRGYQNRHTPNDIDSDDDGSEFGPLRKVFGHKSRSSTLLPPKSQRQREDRK 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2329g00001 682 MobiDBLite consensus disorder prediction 294 310 - -
Gabi2329g00001 682 SUPERFAMILY ARID-like 4 71 IPR036431 GO:0003677
Gabi2329g00001 682 SMART ELM2_2 481 532 IPR000949 -
Gabi2329g00001 682 MobiDBLite consensus disorder prediction 223 252 - -
Gabi2329g00001 682 Pfam ARID/BRIGHT DNA binding domain 4 59 IPR001606 GO:0003677
Gabi2329g00001 682 MobiDBLite consensus disorder prediction 639 682 - -
Gabi2329g00001 682 MobiDBLite consensus disorder prediction 235 252 - -
Gabi2329g00001 682 CDD ARID 4 61 - -
Gabi2329g00001 682 Gene3D - 2 74 IPR036431 GO:0003677
Gabi2329g00001 682 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 1 670 - -
Gabi2329g00001 682 SMART sant 577 630 IPR001005 -
Gabi2329g00001 682 ProSiteProfiles ARID domain profile. 1 65 IPR001606 GO:0003677
Gabi2329g00001 682 CDD SANT 581 628 IPR001005 -
Gabi2329g00001 682 MobiDBLite consensus disorder prediction 639 659 - -
Gabi2329g00001 682 MobiDBLite consensus disorder prediction 285 310 - -
Gabi2329g00001 682 SMART bright_3 2 66 IPR001606 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2329g00001 Gabi-Chr2329 9532 15867 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Gabi2329g00001 ARID 2.2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2329g00001 - - gmx:100780550 773.467