Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2328g00052 ATGGGTTCTTCGAATTTGGAGTTGCATGTACGAATCTTTGTCACCTCCATGGTGATTCTCACTGGAACTTTCTGTGTTGGGGACACTGACCTTGTTGATGTTGCAGCAATCAATAGTCTGTATGTTGCTCTGGGCTCACCATCTCTTCAAGGGTGGAAACCTGTGGGAGGAGATCCATGTTTAGAACAGTGGCAAGGTGTGGCTTGTGTCTTCTCCAACATAACTTCCATACGACTCGGAGGCATGAATTTGGGTGGACAGCTGGGCAGTAATTTGAATTTCCCATCCATTATAGAAATAGATCTTAGCAACAACCACATTGAAGGGGTCATTCCATTCACTTTGCCTCCTACTCTGAGGAACTTGTCTCTTTCAGGAAACCAGTTAACTGGAAGCATTCCAGATGCCTTATCCTTATTAACTCAATTGTCACACTTGGATTTTTCAAGTAACAACTTGAGTGGTCAGTTGCCTTCCTCAACAGGGAGTTTATCATCTCTTATCACATTACTCTTGCAGAACAATCAACTTTCTGGGACCCTCTATGTTTTGCAGGACCTGCCTCTTCAGGATCTGAATATAGAGAATAATTTATTCTCCGGGCCCATTCCTCCAAAGTTGTTGAGTATCCCTAATTTCAGAAAAGATGGGAATCCATTTAATACAACTATCATCCTGTCACCTCCTGCTGCAGCCCCTTCACCTGTAGCTATGGCTCCATCCCCCAAAGAATCATCTTGGAAAGTGGCAAATAGTCCTTCTGCCCTGACAGCACTAATGCCTGCAAGTACTAGGAAGTCTTTCATAGCTAAGAGCATCATTTGGATTGCTGTTGCAGGCTTCTTAATATTCATTGCATTGGGAGTTTGTCTTTTTATGATATGGTGCTTTAACAGAAGGCGAGAGAAGAAAAATGCTACAAAACATGATGTGGGTGTGTTTACAAGACCTTTGCATAAACCTACATGCAGTGATGCTGGTTTTGAAGCAACTAATCAAGAGGAGAAAGTAGAGAAATCCTTACGTTTATATGAAGTACCAGGTAGAAGAACAAATTCGATTCCAAAGGTTCAGGATGAACAAGAAATATATGTGAAAACAGTATCTGCAACTTCAGAATTCAATAATGGTTGTGAGCTAATCAACACCGGAGGGGGTTCCAAACTTTCGCCTTTGCAGCCACCACCACATTCTCTCCCAACCATTCCTGGTGAGAAGGTCATCATCAATCCAGCTATAGGTACCAAAGTAACTGAAAGACAAGTTAAGACAAGTTCCATCAAAGTTTATACTGTTTCATCACTTCAGCAATATACAAATAGCTTTTCCCAAGAAAATTGTATTGGGGAAGGCACACTTGGGCCCGTTTATAGGGCTGAGCTCCCTGATGGAAAGCTATTGGCAGTTAGGAAATTAGATGCCACTGCTTCCATGGGGCAGAATCATGAGCAATTTCTTCAATTAGTGTCCAGCATCTCAAAAATTCAGCATGCTAATATTGTAAAGCTTATGGGCTACTGTGCCGAGTATGGCCAACGACTACTTGTATACGAGTATTGCAGTAATGGGACCCTACATGATGCACTGCATGGGGATGATGAACACAATATTAAACTTCCATGGAATGCACGCATTCGGGTGGCACTTGGAGCTGCAAGAGCTTTAGAGTATCTGCATGAGAACTTTCAGCCGCCTGTTGTGCATCGAAATTTTAAGTCTGTCAATGTTCTCCTGAATGATGAGTTGGAAGTATGTGTCTCTGATTGTGGATTAGGTCCTTTACTATCTTCTGGTTCTGCTGGTCAGTTATCAGGACGCCTCCTTACAGCATATGGTTACAGTGCTCCTGAATTTGAGTCTGGAAGTTATACACAGCAAAGTGATGTCTTCAGTTTTGGAGTGGTAATGCTAGAACTCCTCACTGGACGAAAATCCTATGACAGGTCGCGGCCTCGTGGAGAGCAATTTTTGGTCAGATGGGCAGTCCCTCAACTCCATGACATTGATGCATTGTCAAAAATGGTTGACCCCTGCTTAAATGGAGCTTATCCTATGAAGTCCTTGTCACGTTTTGCAGATATTGTTTCTTCATGTGTACAGCGTGAACCCGAATTCCGGCCAGCAATGTCTGAGATTGTTCAAGATCTCATGCGAATGATGTAA 2163 0.4276 MGSSNLELHVRIFVTSMVILTGTFCVGDTDLVDVAAINSLYVALGSPSLQGWKPVGGDPCLEQWQGVACVFSNITSIRLGGMNLGGQLGSNLNFPSIIEIDLSNNHIEGVIPFTLPPTLRNLSLSGNQLTGSIPDALSLLTQLSHLDFSSNNLSGQLPSSTGSLSSLITLLLQNNQLSGTLYVLQDLPLQDLNIENNLFSGPIPPKLLSIPNFRKDGNPFNTTIILSPPAAAPSPVAMAPSPKESSWKVANSPSALTALMPASTRKSFIAKSIIWIAVAGFLIFIALGVCLFMIWCFNRRREKKNATKHDVGVFTRPLHKPTCSDAGFEATNQEEKVEKSLRLYEVPGRRTNSIPKVQDEQEIYVKTVSATSEFNNGCELINTGGGSKLSPLQPPPHSLPTIPGEKVIINPAIGTKVTERQVKTSSIKVYTVSSLQQYTNSFSQENCIGEGTLGPVYRAELPDGKLLAVRKLDATASMGQNHEQFLQLVSSISKIQHANIVKLMGYCAEYGQRLLVYEYCSNGTLHDALHGDDEHNIKLPWNARIRVALGAARALEYLHENFQPPVVHRNFKSVNVLLNDELEVCVSDCGLGPLLSSGSAGQLSGRLLTAYGYSAPEFESGSYTQQSDVFSFGVVMLELLTGRKSYDRSRPRGEQFLVRWAVPQLHDIDALSKMVDPCLNGAYPMKSLSRFADIVSSCVQREPEFRPAMSEIVQDLMRMM 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2328g00052 720 ProSiteProfiles Leucine-rich repeat profile. 118 140 IPR001611 GO:0005515
Gabi2328g00052 720 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 30 142 - -
Gabi2328g00052 720 SUPERFAMILY Protein kinase-like (PK-like) 422 716 IPR011009 -
Gabi2328g00052 720 Gene3D Phosphorylase Kinase; domain 1 409 519 - -
Gabi2328g00052 720 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 410 519 - -
Gabi2328g00052 720 Gene3D Transferase(Phosphotransferase) domain 1 520 719 - -
Gabi2328g00052 720 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 143 231 - -
Gabi2328g00052 720 ProSiteProfiles Protein kinase domain profile. 442 720 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2328g00052 720 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 520 720 - -
Gabi2328g00052 720 Pfam Protein tyrosine and serine/threonine kinase 445 716 IPR001245 GO:0004672|GO:0006468
Gabi2328g00052 720 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 24 718 IPR046959 -
Gabi2328g00052 720 Gene3D Ribonuclease Inhibitor 34 228 IPR032675 -
Gabi2328g00052 720 SUPERFAMILY L domain-like 36 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2328g00052 Gabi-Chr2328 267893 275192 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2328g00052 23 720 Strubbelig Receptor Gene Family AT4G03390 51.604 0.0 666
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Gabi2328g00052 PK_Tyr_Ser-Thr 1.5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2328g00052 - - gmx:100793423 1128.24