LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gabi2328g00002	ATGCAAACGAGGTATATGGAGAGATCGAGTAGTATAGCGAGAGAGAAGCGAGGTTTAGATTCAAGTTCCGCTGAGGAAGAGCAGCCTGAAAGGAAGAGACCTGCTTTGGCTAGTGTAATTGTTGAAGCCCTGAAGGTGGACAGTATGCAGAAACTTTGCTCATCACTGGAGCCTATTCTACGTAGAGTTGTTAGTGAGGAAGTGGAGCGTGCTTTAGCAAAATTAGGTCCTGCCAAGCTTGGTGGGAGGTCTTCTCCCAAGCGCATAGAAGGTCCTGATGGAAGCAATTTACAATTACAATTCAAGACCAGGCTATCCCTTCCCCTCTTTACTGGTGGGAAAGTGGAGGGGGAGCAGGGCACTGCCATACATATTGTATTGATTGATGCAAACACAGGCCATGTTGTCACATCTGGCCCATCATCATGTGTCAAAGTAGACATTATTGTGCTTGAAGGCGATTTCAATAATGAGGATGATGATAATTGGAGTGAAGAAGAATTTGAGAGTCATGTTGTGAAAGAACGAGAAGGAAAAAGACCTCTTCTGACTGGTGATCTGCAAGTGACACTGAAGGAGGGTGTAGGAACACTAGGTGAGCTTACATTTACAGACAACTCTAGCTGGATAAGGAGTAGGAAGTTCAGGTTGGGGCTCAAAGTTTCCTCGGGTTGTTGTGAGGGAATGCGTATTCGTGAAGCCAAAACAGAAGCTTTCACTGTTAAGGATCACCGTGGAGAATTATACAAAAAACACTACCCACCTTCCTTGAATGATGAGGTTTGGAGACTGGAGAAGATTGGCAAGGATGGGTCTTTTCACAAAAGGCTACATAAAGCAGGAATACATACTGTAGAAGATGTCGTACGACTTGTGGTCAGAGACCCACAGAGATTGAGGAATATTCTTGGGAGTGGCATGTCAAATAAAATGTGGGATGTTCTTGTTGAGCATGCCAAGACTTGCGTTCTCAGTGGAAAACTTTATGTATACTATCCTGATGATGCAAGGAATGTTGGTGTTGTTTTCAATAACATTTATGAGCTGAGTGGCTTAATCACCAATGACCAATATTACTCGGCTGATTCTCTCTCTGACAGTCAAAAGGTTTATGTGGATACATTGGTGAAGAAAGCATATGAGAATTGGATGCATGTTATCGAGTATGACGGCAAGTCTCTGCTAAATTACAATCAGAATAAGACTTTGGGCATCTCCCAACCTCAGGTTCAAATGGATTCCCATGATTATTCAAATTCAAACACACTTGATCCACAGATCTCCATCCCAACTCTACCAGTTCCTGTACCTATAGGGCAGCCTTCAATGGATCCAGGAGTAACAGTTGGAGGCTATCATGATGGGACAACAACCAGATTCTCAATGCAACCACAGGATGCTAATCTTAATTCTTCTATTCAGTTTGATACTACTGCATTCACTCTACAAAACCAGCTTATGAATGTTTCGCACCAATCTCAACTCCTAAGAAATGAAAATGGGCTGACTCTTGGTCCACCACAATCAGCCACTCCTGGCTTTCAGACTGTCAGTGTTTCAAATCCTACTTATAGAGGATTTGAAGACTTCTTCCCGGAAGAGGATATTCGTATTAGAAGTCATGAAGAGGATATTCGTATTAGAAGTCATGAAATGCTAGAAAATGAAGATATGCAACATCTGCTCCGTATTTTTAATATGGGAGGACAATCTCATGCTTCCTTTAGTGCACCTGAAGATGGGTACCCTTTTTCATCTGCTTACATGCCTGCGACCTCCATGAGCTACAACTTTGATGATGAACGAAACCGTTCCTCAGGAAAGGCTGTTGTGGGCTGGCTCAAGCTTAAGGCAGCTTTGAGATGGGGCATTTTTATTCGCAAGAAGGCTGCTGAGAGACGTGCACAGCTTGTTGAGCTTGATGACTCATAG	1932	0.4317	MQTRYMERSSSIAREKRGLDSSSAEEEQPERKRPALASVIVEALKVDSMQKLCSSLEPILRRVVSEEVERALAKLGPAKLGGRSSPKRIEGPDGSNLQLQFKTRLSLPLFTGGKVEGEQGTAIHIVLIDANTGHVVTSGPSSCVKVDIIVLEGDFNNEDDDNWSEEEFESHVVKEREGKRPLLTGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVSSGCCEGMRIREAKTEAFTVKDHRGELYKKHYPPSLNDEVWRLEKIGKDGSFHKRLHKAGIHTVEDVVRLVVRDPQRLRNILGSGMSNKMWDVLVEHAKTCVLSGKLYVYYPDDARNVGVVFNNIYELSGLITNDQYYSADSLSDSQKVYVDTLVKKAYENWMHVIEYDGKSLLNYNQNKTLGISQPQVQMDSHDYSNSNTLDPQISIPTLPVPVPIGQPSMDPGVTVGGYHDGTTTRFSMQPQDANLNSSIQFDTTAFTLQNQLMNVSHQSQLLRNENGLTLGPPQSATPGFQTVSVSNPTYRGFEDFFPEEDIRIRSHEEDIRIRSHEMLENEDMQHLLRIFNMGGQSHASFSAPEDGYPFSSAYMPATSMSYNFDDERNRSSGKAVVGWLKLKAALRWGIFIRKKAAERRAQLVELDDS	643

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gabi2328g00002	643	MobiDBLite	consensus disorder prediction	1	34	-	-
	Gabi2328g00002	643	PANTHER	OS02G0177800 PROTEIN	14	558	IPR012416	GO:0005516
	Gabi2328g00002	643	Pfam	Calmodulin binding protein central domain	256	322	IPR046830	-
	Gabi2328g00002	643	MobiDBLite	consensus disorder prediction	9	33	-	-
	Gabi2328g00002	643	Pfam	Calmodulin binding protein-like N-terminal domain	97	244	IPR046831	-
	Gabi2328g00002	643	Pfam	Calmodulin binding protein C-terminal domain	327	389	IPR046829	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gabi2328g00002	Gabi-Chr2328	26922	32536	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gabi2328g00002	9	638	Calmodulin-binding Proteins	AT5G57580	62.826	0.0	794

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gabi2328g00002	-		-	gmx:100802994	1084.71