Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2325g00015 ATGGCGCCAAAACGAAAACCTTCATCTCCAGTCTCCATAGGTAACTGCGAGATTACGGTTGAGGCCAACCGCTTCACCTGCAACTCCGATTCAAACGGCCTCTTAATCTCTATCCCCAGAAGCGGAAAGATCAGAGTATCAGATGTGTCTGCAAACCATGGAAACGCTTCTGAGGATTTCAAGTCCGGAGATGGAGAACACGAGTTCGTGCTAGTTAATCCTAAAGATGTTGATGGTATTAGCAAATCCTACCTTCAGGAAGTATTACAGATGTATATGACAGAGCTACCTGGAATGAATTATGCTGCGAATACCGGAAAGCAATCAAAGTTTCTTGAGAGATGTGTGACGAATGGGAAATATCGAACACTACTTCTGAAATCCAGTTCGGTAGGAAATTTTGGAAAGGTTATAGCTGCAATCACATATCAAATCATCCCTGCGGATACAGAATATGCAGAGATCCCACTTGCAGCTGTCAATGCAATCTATCAACGGAAGGGTTTTGGTCATCTATTGTTTGCAGAGCTATGGAGGAGACTTAATAGTGTTGGCATTCGTTCTATTTTCTGTTGGGGAGACAAAGAATCTGAAGGTTTTTGGCTTAAACTGGGTTTTATATCAATAGCACAGGTAGATACCAAAGGTAGAGCCCGAAGGTTGCCTGTAAAAGCTGATATTCGCAAATCATTATGCTTTCCTGGTGGTTCAACTCTCATGGTTTGCCACCTAAGGAAGGAATTATTAGCTGATGATGCTAACACTGTGAAGTGTCTCCCCTCACAGCTTCATCAGAATTCCTTTACACCTGCCATTGCTGAAAATGAGCGGGTTGAATTATCAGGAGAGTTACATATTGATTTGGACTTTGCCAATAGATCTTCCTATAGAACAGAAAGTACAGATAAAATTCAACCTGAAGCTTTAGTTAAAGATGGATCTTCCAGAGAGTATGACAAACTTAGTGGGTTTGACTGTCACAATCCTAAGCACTGCTGCAGTGACATTGTTCCTTTTGCCAAAGCAGATGATGACAGACAGGACGCTGGTACAGGTTTTTCACAGGATGGAAGTGATGCTAATGTCAAGCATTGTTCTCAATCTACAAAAGGTGCAAAGAGGACCTGGGAAGCCTCTTTTTCCTCGTTGAAGTCAAAAAGAGTGAAGGGAAGCCAGTTGGTTGACTGTGGATCAGATTCTAGCTGGGGTTTCATCTCAGAGGATGATAGGGCCGATCCTTGTTTTGTGGATGTCCCTCATGCTGATCCTCTGATCAAAAAAAATTCTGAAAAATGTACGGGAAATTATATGCATTTAGAACCTCCCATCAACAAAGAACTGCCATCAACTAAACAACGCTTTAGAATCATGTTGATGAATATCGCTGATGATGCTAAGAAAGCACAGCTTACAAAGGTGATTGAAGACCTTGGTGGAACTATGGCCTATGATGGAAGCATGACCACACATGTTGTCACTGGAAAAGTGAGAAAAACTCTGAATTTCTGTACCGCCCTCTGTTCAGGTGCTTGGGTGCTCTCATCAAGTTGGTTGAAAGAAAGTTTTCGCGAAAGCAGATTTGTTGATGAATTGCCTCACGTACTGAATGATAAGGATTTTCAGTTGAAGCACAAATCTGATTTAATAAGTGCAGTTTTCCGAGCAAAAGCTAGTCCCCATGCTTTGTTCAAGGGATATAATATATATATTGCAGCTCATGTTCAAACACCTGCTAAAACACTGTCTGCTATTGTCAGGTCTGCAGGTGGTAATGTTATTAGTGGGCTCGAAAATGTAAATGATGCATCAACAACAATCTTTGTGACATGCGAAGAAGATACAGAAGAAGCAATGATGGCTGCAAAGAAAGGCATTCGGACTTTCAGTAGTGAGTGGTTCATGAACTGTGTCATGAGACAGGAGCTTGACTTGGAGGCCTCCCAATTTGCTGAGTCCTTGTAA 1962 0.419 MAPKRKPSSPVSIGNCEITVEANRFTCNSDSNGLLISIPRSGKIRVSDVSANHGNASEDFKSGDGEHEFVLVNPKDVDGISKSYLQEVLQMYMTELPGMNYAANTGKQSKFLERCVTNGKYRTLLLKSSSVGNFGKVIAAITYQIIPADTEYAEIPLAAVNAIYQRKGFGHLLFAELWRRLNSVGIRSIFCWGDKESEGFWLKLGFISIAQVDTKGRARRLPVKADIRKSLCFPGGSTLMVCHLRKELLADDANTVKCLPSQLHQNSFTPAIAENERVELSGELHIDLDFANRSSYRTESTDKIQPEALVKDGSSREYDKLSGFDCHNPKHCCSDIVPFAKADDDRQDAGTGFSQDGSDANVKHCSQSTKGAKRTWEASFSSLKSKRVKGSQLVDCGSDSSWGFISEDDRADPCFVDVPHADPLIKKNSEKCTGNYMHLEPPINKELPSTKQRFRIMLMNIADDAKKAQLTKVIEDLGGTMAYDGSMTTHVVTGKVRKTLNFCTALCSGAWVLSSSWLKESFRESRFVDELPHVLNDKDFQLKHKSDLISAVFRAKASPHALFKGYNIYIAAHVQTPAKTLSAIVRSAGGNVISGLENVNDASTTIFVTCEEDTEEAMMAAKKGIRTFSSEWFMNCVMRQELDLEASQFAESL 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2325g00015 653 MobiDBLite consensus disorder prediction 347 368 - -
Gabi2325g00015 653 ProSiteProfiles BRCT domain profile. 558 642 IPR001357 -
Gabi2325g00015 653 Pfam Acetyltransferase (GNAT) family 135 206 IPR000182 GO:0016747
Gabi2325g00015 653 Gene3D BRCT domain 445 556 IPR036420 -
Gabi2325g00015 653 SMART BRCT_7 560 640 IPR001357 -
Gabi2325g00015 653 SMART BRCT_7 448 525 IPR001357 -
Gabi2325g00015 653 CDD BRCT_MDC1_rpt1 454 528 - -
Gabi2325g00015 653 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 72 212 IPR016181 -
Gabi2325g00015 653 Gene3D - 63 222 - -
Gabi2325g00015 653 SUPERFAMILY BRCT domain 439 530 IPR036420 -
Gabi2325g00015 653 Gene3D BRCT domain 560 652 IPR036420 -
Gabi2325g00015 653 Pfam BRCT domain, a BRCA1 C-terminus domain 561 642 IPR001357 -
Gabi2325g00015 653 MobiDBLite consensus disorder prediction 351 368 - -
Gabi2325g00015 653 Pfam BRCA1 C Terminus (BRCT) domain 462 522 IPR001357 -
Gabi2325g00015 653 CDD NAT_SF 135 192 - -
Gabi2325g00015 653 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 64 250 - -
Gabi2325g00015 653 CDD BRCT_PAXIP1_rpt6_like 562 643 - -
Gabi2325g00015 653 ProSiteProfiles BRCT domain profile. 446 535 IPR001357 -
Gabi2325g00015 653 SUPERFAMILY BRCT domain 496 642 IPR036420 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gabi2325g00015 BRCT_2 4.1e-07 CL0459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2325g00015 - - gmx:100806087 1049.65