Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2325g00002 ATGAGCAATCACAAGGTTGAAACTGAAAGCAGCTACAATAATTATGCTAAACCTAAGAGTGTGCCTGGTATTGAGGAATCTGTTTCCAGCCAGCCAGAAAAAAGAGGAAGATTGGAGTCAAGGAAGAAACTGAAGAAAGTAAGGTCAATAAGGCTTCTAAGAATGTCAAGCATGAGATCATCATCCTCTAGAGGAGGGAAACCCCAATATGATAATCTCTCAATTCTTTCATCTGTTGGCACAGAAAATTCAGTGCCTCCAACCCCACCAATTGAGAAGCCAGATGCATCACCCAATTACATGAAGGGTACTAGTAGTTCTCATGCAAAGGATAGTTTTCAGGTAAATTTTCTGATTTTGAAAAGGAAACTGAATTCATCAAGATCAATCAAGCTTGCAACTTTCAAGGGCCAAAAATCAAAAAGAAACCATTCTGAATCCATTTATGGCAGTGATGGCCAGAATAGAAAGAGTACAAGTGATATGCAATCTGAATCCTATGCTGGTAACAAATCCCAGAGAGTCATTACCAGAAGATTAAGCTTGAAGCCTGTGAGATTCTTAACAAAAATGCCGACTTTCAAATCAAAGAATTCTTCCATGGAGAAAGGCCCTAAGAAGATGTCTCAATCCCAAGACTCAAGCTTGCATAAAGCCACCTGTTCTTCCACTCTCAAAGGTTCCCATTTCCCTGATCACATTGAGCTCCCACAAGAGGGAAGTGGTTCTCAAGAAGTATCAGCTATGAAGGTTTGTCCATATACTTATTGCTCTCTTCATGGTCATCGCCATGGCAATTTGCCTCCACTGAAGCGCTTTGTGTCAATGAGGAGGCGTGTGTTGAAGACTCAAAAGATAATGAAAATGGATGGTCAACCTGTTACTAGATCAAAGAAGTTTGGTAATGTAAGGAAAGACACTCAGAAAACCATAACTATCCACAGTGAAGAAGATTCCAAGGTGACTGAGACAGCAGGGAATGACAAGAATATAGCTGCATGCAAGAAAAATGATGAAAGTGGTGCTGTGGAATCAACTTCAACAGATGCAATCATGTTTTCTGCTTCTGATATTGAGATGTTGGAGGGAGAAGTAACTACCAAAGGCAAAAAATTTGAGCCAGATTATGAAGTACTGCAGATGAGTTCTGCACAGAAAGAGCCTAAACCTGCTAGCACTACTGATGTGGCCTATGGAATGCAGCAAAGAGATCACAAATATATAAAAATGTGGCACTTGATGTATAAGCATGCAGTGTTAAGTAACACAGGAAAGTGTGAAAATAAGCTTCCTTTTGATGAGAAGGACAAACAAGGAAGTGGGCATGATGCTCTCCTATTTGATGGAGTAAACAGCTCTTCTTGTCAAGATTATTGTGAAACTGATCAGGATAAGGATGATGAAAATAAGAATGTAATTGAGCTAGTGCAGAAAGCATTTGATGAAATCCTTCTCCCAGAACCTGAAGACCTTTCTTCTGATGATCATTTCAAATCTAGAGGGATTGGTTCACATGAGGTGATCTTAGAAAAGAGTGAAGGCAAGAGAGAAGAAACGAATGCCTCAACATGCTCCGAATCTCCTAAAGAAGCACAGAAGATGGGGACCAAACCTGACAAAAAAACACCAAAAAGCTGGAGCAATCTGAAGAAGTTGATCCTCTTGAAAAGGTTTGTAAAGGCATTAGAGAAGATAAGAAACATCAACCTACGAAGACCAAGACTTTTGCCTTCAGATGCTAACTTAGAAGCAGAAAAAGTTTTTCTCAAGCACCAAACAGCAGAAGAGAGAAAAAATGCTGAGGAATGGAAGCTGGACTATGCACTTCAAAAGGTTATTTCTACACTTGCACCTGCTCAAAGGCAAAGAGTGGCACTTCTAGTTGAAGCTTTTGAAACAATTTTGCCATTTCAAAATGCCGAAAATGGCCAAGAGTCTTCTGCAACAGTGCAATCTCAAGCAAATCCAATTCAATCGCTTGATGATTCCTCAGATCATAGCAAGGAAGAAACTGACAAAGCAAAGGATTATGGTTATTCTGCTAAGATATTTCTTGGAAAAACATCATGCTTTCATAATAGTACTATGGAATTTGCAGATAATGCTAGTGATAATCCAATGCCTGAACTTCACATTCCCGTTGTGATCAAAGAAAGCAGTCTTGACTATCTTGGGGCTAACACAGTGAAGAATAGGCCTGCATCTGGAGCCACTGAAGAAGACTTAAATGGAAAGCAAGATTTAGCCAGCAGTCATGAAAATGGGGAGAAAATCTCAAATGACAATGATAATATTTATCTTGAAGAGGTCAAAGATTCCAGATCATGGTCCTTAAGTAAGCCAATTGAAATTATAAGCAGCTGTCATGAGGAGGCTCAAACCAATGAAGTTCCAGAAGATTTTATATCAAATTTGCATGCAGAAAACCCAAATATCAAATGTGAGTCACCTGGAAGAGATTTTGAAACCAAGAATCCAAGTGGTGATAATAGGGAGCAAACTTCTGTGTCTAAAAGTTCAATCCTAGAAGGACTTGTCAGATCACTTAGATCAAATTTGGTTGGTTCAGGAGCACCTTCAAACCTATTAGATGAACAAACAGAAGACAGAAAAGAAAGGATTGAAAAAGCTAAGCTGGAAACTGGGAGTCTTGAAGAGTTCCCTACCCATGAACAATCTGAAGCTCCTATGAGTGCTGTTGGAGAGCCTGAGACTCAGCCAGAGAAACAGAGTTACAATGGACTGTGGTACTTGGTGTATAAGCACATGGCATCAGATGCAGCTGAAAACAGTTCCCAGTCACTAATTGATGGAGCAGATGAGAAAGAGTCAGGTACACCTATGATTAATCAAGATATGCACTTCAAAGATCATGTTGTAGTTGATCCAGAAGTTGAACTCCAACAGATTGAAGCCATCAAGATGGTAGAAGAAGCAATTGATTCAATCCTCCCAGATGTTCAGGACCACTTACCAGACAACACAGTTTCAAACAACTCCAAACATTCAGACAGAACTGAAAGAGTGTGCAGTGGAGGCCTGAATCAAAAAGAAGAAAGAATGGAATCTGGAAATGGAATAAACCAAGAACAAGAAGAAGAAGGATCAGCACCAAAGGAGGGAAACAAACCAAACCAGTCATTGTCTAGAAGCTGGAGCAATCTTAAAAAAGTGATCCTGCTTAGGAGGTTCATCAAGGCATTGGAAAAAGTAAGGAAATTCAACCCAAGAGGGCCTAGATATCTACCTATAGAGCCTGATTCAGAAGCTGAAAAAGTTCACTTAAGGCATCAAGACATGGAAGAAAGAAAAGGCACAGAAGAATGGATGCTTGATTATGCACTTCGACAGGTTGTTTCCAAATTAACCCCAGCTAGGAAAAGAAAAGTGGAGCTGCTAGTGGAAGCTTTTGAAACAGTCATACCAACCACAAAAAATTGA 3441 0.3978 MSNHKVETESSYNNYAKPKSVPGIEESVSSQPEKRGRLESRKKLKKVRSIRLLRMSSMRSSSSRGGKPQYDNLSILSSVGTENSVPPTPPIEKPDASPNYMKGTSSSHAKDSFQVNFLILKRKLNSSRSIKLATFKGQKSKRNHSESIYGSDGQNRKSTSDMQSESYAGNKSQRVITRRLSLKPVRFLTKMPTFKSKNSSMEKGPKKMSQSQDSSLHKATCSSTLKGSHFPDHIELPQEGSGSQEVSAMKVCPYTYCSLHGHRHGNLPPLKRFVSMRRRVLKTQKIMKMDGQPVTRSKKFGNVRKDTQKTITIHSEEDSKVTETAGNDKNIAACKKNDESGAVESTSTDAIMFSASDIEMLEGEVTTKGKKFEPDYEVLQMSSAQKEPKPASTTDVAYGMQQRDHKYIKMWHLMYKHAVLSNTGKCENKLPFDEKDKQGSGHDALLFDGVNSSSCQDYCETDQDKDDENKNVIELVQKAFDEILLPEPEDLSSDDHFKSRGIGSHEVILEKSEGKREETNASTCSESPKEAQKMGTKPDKKTPKSWSNLKKLILLKRFVKALEKIRNINLRRPRLLPSDANLEAEKVFLKHQTAEERKNAEEWKLDYALQKVISTLAPAQRQRVALLVEAFETILPFQNAENGQESSATVQSQANPIQSLDDSSDHSKEETDKAKDYGYSAKIFLGKTSCFHNSTMEFADNASDNPMPELHIPVVIKESSLDYLGANTVKNRPASGATEEDLNGKQDLASSHENGEKISNDNDNIYLEEVKDSRSWSLSKPIEIISSCHEEAQTNEVPEDFISNLHAENPNIKCESPGRDFETKNPSGDNREQTSVSKSSILEGLVRSLRSNLVGSGAPSNLLDEQTEDRKERIEKAKLETGSLEEFPTHEQSEAPMSAVGEPETQPEKQSYNGLWYLVYKHMASDAAENSSQSLIDGADEKESGTPMINQDMHFKDHVVVDPEVELQQIEAIKMVEEAIDSILPDVQDHLPDNTVSNNSKHSDRTERVCSGGLNQKEERMESGNGINQEQEEEGSAPKEGNKPNQSLSRSWSNLKKVILLRRFIKALEKVRKFNPRGPRYLPIEPDSEAEKVHLRHQDMEERKGTEEWMLDYALRQVVSKLTPARKRKVELLVEAFETVIPTTKN 1146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2325g00002 1146 Coils Coil 1014 1034 - -
Gabi2325g00002 1146 MobiDBLite consensus disorder prediction 1000 1015 - -
Gabi2325g00002 1146 MobiDBLite consensus disorder prediction 745 761 - -
Gabi2325g00002 1146 MobiDBLite consensus disorder prediction 1 17 - -
Gabi2325g00002 1146 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 336 636 IPR044681 GO:0005516
Gabi2325g00002 1146 SMART CaM_binding_2 519 636 IPR012417 GO:0005516
Gabi2325g00002 1146 SMART CaM_binding_2 1028 1142 IPR012417 GO:0005516
Gabi2325g00002 1146 MobiDBLite consensus disorder prediction 813 827 - -
Gabi2325g00002 1146 MobiDBLite consensus disorder prediction 54 85 - -
Gabi2325g00002 1146 MobiDBLite consensus disorder prediction 195 227 - -
Gabi2325g00002 1146 MobiDBLite consensus disorder prediction 730 761 - -
Gabi2325g00002 1146 MobiDBLite consensus disorder prediction 195 242 - -
Gabi2325g00002 1146 MobiDBLite consensus disorder prediction 987 1049 - -
Gabi2325g00002 1146 MobiDBLite consensus disorder prediction 878 908 - -
Gabi2325g00002 1146 MobiDBLite consensus disorder prediction 147 175 - -
Gabi2325g00002 1146 MobiDBLite consensus disorder prediction 642 673 - -
Gabi2325g00002 1146 Pfam Plant calmodulin-binding domain 531 636 IPR012417 GO:0005516
Gabi2325g00002 1146 Pfam Plant calmodulin-binding domain 1040 1142 IPR012417 GO:0005516
Gabi2325g00002 1146 MobiDBLite consensus disorder prediction 1 107 - -
Gabi2325g00002 1146 MobiDBLite consensus disorder prediction 135 175 - -
Gabi2325g00002 1146 MobiDBLite consensus disorder prediction 642 661 - -
Gabi2325g00002 1146 MobiDBLite consensus disorder prediction 1023 1039 - -
Gabi2325g00002 1146 MobiDBLite consensus disorder prediction 808 839 - -
Gabi2325g00002 1146 MobiDBLite consensus disorder prediction 510 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2325g00002 Gabi-Chr2325 63531 67746 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2325g00002 540 665 Calmodulin-binding Proteins AT5G04020 42.963 3.76e-20 95.5