Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2324g00021 ATGGCATCATCAAGCTCTTACAATTCTCCATGTGCTGCCTGCAAATTCTTAAGGAGGAAATGCATGCCAGGGTGCATCTTTGCACCTTACTTTCCACCCGAAGAACCCCAAAAATTCGCCAACGTGCACAAGATTTTTGGTGCTAGCAATGTCACCAAACTCCTTAATGAACTCCTCCCTCACCAGAGGGAAGATGCAGTGAATTCCCTTGCCTATGAAGCAGAGGCACGTGTCAGAGACCCAGTTTATGGATGCGTAGGTGCCATCTCTTTCCTTCAGAGACAAGTTCAAAAGCTCCAAAAGGAGCTTGATGCTGCTAATGCTGATCTTGTTCGCTATGCCTGCAATGAAATCCCTTCAGCAACATCAATGCCTTTGCCACCAGGATTCGCTTCAATTCAACAAATTCCTCAAAGGCCATTAATTAATGCAAGAATTGGTAATGAAGGAAGTGGTTTTTATCGTCAATCTCCAACCACTTTCTCCCCTTATTCTCTTCCATGGACTGATACTTCTTCTGAGGATATCAACGTTGGAGGAGGAGAAGGAGGAGGTAACTTGTGA 564 0.4486 MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQKLQKELDAANADLVRYACNEIPSATSMPLPPGFASIQQIPQRPLINARIGNEGSGFYRQSPTTFSPYSLPWTDTSSEDINVGGGEGGGNL 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2324g00021 187 Coils Coil 89 116 - -
Gabi2324g00021 187 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 127 - -
Gabi2324g00021 187 MobiDBLite consensus disorder prediction 164 187 - -
Gabi2324g00021 187 Pfam Lateral organ boundaries (LOB) domain 10 107 IPR004883 -
Gabi2324g00021 187 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2324g00021 Gabi-Chr2324 221534 222097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2324g00021 1 114 AS2 family AT5G63090 93.043 4.55e-75 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gabi2324g00021 LOB 2.3e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2324g00021 - - gmx:100803667 295.049