LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gabi2322g00020	ATGGAGAGGGTTGCAGAGCCGAAGGCACTTCCTCGGTCATTTCCTATCCTTGTTGAGGTATCGAATGCGCACACGGCTGCAGCAAGAGAGGCAGGTCAGAGAATCGTTGGGCAGGAGGTTTCAAGTGCTGGGGGGATTTCAGCAAGAGAAGTGAATCAATTGTCAAAGGCAAGGGATGTGCCTATCTCGCGTTTGGCCTCCATCAGAGAAGTGGCTCAGTTATCAAATGCGCGGATAATTTTGGTAAGGGATGATATGGGATTCGATACTCGAGCCTCTCAAGAATCTCTCACCTTTGCGCCTGATAGAACATGGAAAGGAAAGGCCTCTATACCCGAACTAGAAGAACTGATGCCTGATGTTGAGATTGAGACTTTGAAGGATAGTAGTGATTCAATTGAGGATAGTGGTCCAAGTTTATTTGCTGGTGCTAGTCATCCCCCTGAACCTGTTGATACAGATCTTATGAGAACGGTTTATGTACCAATAGGTCAAAACAAATCTGAGGCTGGATGCTTAATGAAGAGCTTACCCTTGAAGGGCCCTTTCCTTGAAGATCTCTCAATTCGTGTTCCCACCAACAAACCAAGTCCAGCTTTTCTTTCCCCTGAAGAAAGTCTGGTTGAAGAATTAAATGACATAGTAAACTTATCCTCACCATTTTTGGGTGCACGAGCATCACAGAATACCGAGAACTCTCTCCTCCCTCCAGATTCTGAGGAAAAAGAATGTGTTTGGGATGCTTCTCTGCCTCCTAGTGGCAATGTCAGTCCACTTAGTAGTATTGATAGTACTGGTGTTGTCACAGCAATGAGCATTGTTAATAGTTGCGCTAGTACATATCGGAGTGATGCAATCACTAGTGATGGCATGCTTAGTTTAGACAGGAACTGTGATAGTACTAAAGGGAGTGTAAGGGGTGATTCACTAGAGAGTGCAAAAACTAGTGCTAGTCGGGCAAGTGATAGCAGTGGCCTCAGTGATGACAGCAACTGGAGCAACATTACTGGTAGTGCCAATAAGCCTCACAAAGGAAATGATCCTAGGTGGAAGGCTATCCTTGCCATCCGATTACGGGATGGAATTTTGGGCATGAGTCATTTTAGGTTACTCAAACGACTTGGATGTGGTGATATTGGAAGTGTATATCTCTCAGAGTTGAGTGGAACTCGGTGTTATTTTGCAATGAAGGTTATGGATAAGGCTTCCCTAGCAAGCAGAAAGAAGCTGACTAGAGCACAGACAGAGAGGGAGATATTGCAGTTGCTGGATCATCCATTTCTACCAACTTTGTATACACATTTTGAGACTGACAGATTCTCCTGTTTGGTAATGGAATATTGTCCTGGAGGTGATCTACACACTTTAAGGCAGCGGCAACCTGGAAAACATTTCTCGGAATATGCTGCACGCTTTTATGCTGCGGAGGTCCTGCTGGCTCTTGAATATCTTCACATGCTTGGAGTTGTGTATAGAGACCTTAAACCTGAAAATGTGTTGGTCCGAGATGATGGTCACATAATGCTCTCAGATTTTGATCTTTCCCTCAGATGTGCTGTTTCACCGACTCTTATTAGAACTTCCTACAATGGCGACCCTTCAAAACGGGCTGGTGGTGGTGCATTCTGTGTTCAACCTGCTTGTATTGAGCCATCATCAGTATGCATCCAACCTGCATGTTTTATTCCTCGGCTTTTTCCTCAGAAAAACAAAAAGTCGCGGAAGCCAAGAGCTGAGCCTGGGATGCCTTCTAGCACACTTCCAGAGCTTGTTGCTGAGCCTACTTCAGCACGATCTATGTCCTTCGTTGGCACCCATGAATACCTCGCCCCTGAAATTATCAAAGGAGAAGGTCATGGCAGTGCAGTTGATTGGTGGACATTTGGAATTTTCTTGCATGAGCTATTATATGGTAAAACCCCTTTCAAAGGGTCAGGAAACCGTGCTACACTTTTCAATGTAGTAGGCCAGCAACTCAGGTTTCCCGAATCACCCGCAACCAGTTATGCCAGCCGGGATCTTATCCGTGGCTTGCTGGTGAAGGAGCCACAGCATCGTCTTGGGGTTAAGAGGGGTGCAACTGAGCTCAAGCAACACCCTTTCTTTGAAGGTGTGAACTGGGCATTGATTAGGTGCAGCACACCACCAGAAGTGCCAAGACCAATGGAAAATGAGCTACCAGGGAAGGTTGGAGCAGTTGATAATGTTAGTGTTGGCAGCACTAGTAAGAGGATAGTAGGTACTGACATGAAGTCTGGTGGTAAATATCTGGACTTTGAGTTCTTTTAG	2289	0.4557	MERVAEPKALPRSFPILVEVSNAHTAAAREAGQRIVGQEVSSAGGISAREVNQLSKARDVPISRLASIREVAQLSNARIILVRDDMGFDTRASQESLTFAPDRTWKGKASIPELEELMPDVEIETLKDSSDSIEDSGPSLFAGASHPPEPVDTDLMRTVYVPIGQNKSEAGCLMKSLPLKGPFLEDLSIRVPTNKPSPAFLSPEESLVEELNDIVNLSSPFLGARASQNTENSLLPPDSEEKECVWDASLPPSGNVSPLSSIDSTGVVTAMSIVNSCASTYRSDAITSDGMLSLDRNCDSTKGSVRGDSLESAKTSASRASDSSGLSDDSNWSNITGSANKPHKGNDPRWKAILAIRLRDGILGMSHFRLLKRLGCGDIGSVYLSELSGTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIRTSYNGDPSKRAGGGAFCVQPACIEPSSVCIQPACFIPRLFPQKNKKSRKPRAEPGMPSSTLPELVAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPESPATSYASRDLIRGLLVKEPQHRLGVKRGATELKQHPFFEGVNWALIRCSTPPEVPRPMENELPGKVGAVDNVSVGSTSKRIVGTDMKSGGKYLDFEFF	762

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gabi2322g00020	762	PANTHER	FLIPPASE KINASE 1-RELATED	128	724	-	-
	Gabi2322g00020	762	ProSiteProfiles	Protein kinase domain profile.	368	702	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gabi2322g00020	762	Gene3D	Transferase(Phosphotransferase) domain 1	452	520	-	-
	Gabi2322g00020	762	MobiDBLite	consensus disorder prediction	297	345	-	-
	Gabi2322g00020	762	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	489	501	IPR008271	GO:0004672\|GO:0006468
	Gabi2322g00020	762	MobiDBLite	consensus disorder prediction	297	341	-	-
	Gabi2322g00020	762	FunFam	Serine/threonine-protein kinase D6PK-like	366	451	-	-
	Gabi2322g00020	762	SUPERFAMILY	Protein kinase-like (PK-like)	349	723	IPR011009	-
	Gabi2322g00020	762	Pfam	Protein kinase domain	599	702	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gabi2322g00020	762	Pfam	Protein kinase domain	369	521	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gabi2322g00020	762	FunFam	serine/threonine-protein kinase D6PK-like	597	720	-	-
	Gabi2322g00020	762	CDD	STKc_phototropin_like	366	721	-	-
	Gabi2322g00020	762	Gene3D	Transferase(Phosphotransferase) domain 1	597	720	-	-
	Gabi2322g00020	762	SMART	serkin_6	368	702	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gabi2322g00020	762	Gene3D	Phosphorylase Kinase; domain 1	366	451	-	-
	Gabi2322g00020	762	FunFam	serine/threonine-protein kinase D6PK-like	452	519	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gabi2322g00020	Gabi-Chr2322	264406	269626	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gabi2322g00020	1	762	AGC Kinase Gene Family	AT2G44830	66.412	0.0	951

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_RSK-2	Gabi2322g00020		Pkinase	1e-36	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gabi2322g00020	-		-	gmx:100792314	1327