Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2322g00014 ATGAATCTTCAACCCACCATTCTTGAATCTGATCTTGCTCTTCTCGAATCCATTCGTAGCTACCTCCTCGACGACGACTCCAGTGCACTCCTGGCGGTTCCCACCGCCTCTCACGGCGTTGCTCCGGCCACCAACCAGGGTTCCCCCACCGGGAGTGGGAGTGAATCAACGTCTACCCTTTACGATTATGCGGTCAACTCTCCGTTGGTTTCTTCGGAACAAACGACATCAGCTGTTGTGGAGCATCGGGGTGCTTCGAATGCGGCGGCGCGTGAGAGACACGCGCCTCCGTGTATGAGGGGAGTGAGGCGTAGACCGTGGGGAAAGTTTGCTGCGGAGATTAGAGATCCTAAGAAGAACGGCGCGAGAGTGTGGCTCGGGACTTATGAGTCGGCTGAGAACGCGGCTTTGGCTTATGACCGAGCCGCTTTCAAAATGCACGGATCAAAAGCCAAGCTAAATTTTCCACATTTGATTGGCTCTGATGTTGTTCAGCCGATGCAAGTGGCAGCTAAGCGGTGTTCGCCGGAGCCGTGTTCATTGGGAGTGGCTTTAGAGCCGAAAATGAAGATGAGCCGAGTTAGCATTATTGACACTTCAGAAATGTAG 609 0.5353 MNLQPTILESDLALLESIRSYLLDDDSSALLAVPTASHGVAPATNQGSPTGSGSESTSTLYDYAVNSPLVSSEQTTSAVVEHRGASNAAARERHAPPCMRGVRRRPWGKFAAEIRDPKKNGARVWLGTYESAENAALAYDRAAFKMHGSKAKLNFPHLIGSDVVQPMQVAAKRCSPEPCSLGVALEPKMKMSRVSIIDTSEM 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2322g00014 202 MobiDBLite consensus disorder prediction 39 58 - -
Gabi2322g00014 202 FunFam Ethylene-responsive transcription factor 2 98 157 - -
Gabi2322g00014 202 SUPERFAMILY DNA-binding domain 98 157 IPR016177 GO:0003677
Gabi2322g00014 202 CDD AP2 100 158 IPR001471 GO:0003700|GO:0006355
Gabi2322g00014 202 ProSiteProfiles AP2/ERF domain profile. 98 156 IPR001471 GO:0003700|GO:0006355
Gabi2322g00014 202 PANTHER DNA-BINDING DOMAIN 59 168 IPR044808 GO:0003700|GO:0009873
Gabi2322g00014 202 Pfam AP2 domain 97 148 IPR001471 GO:0003700|GO:0006355
Gabi2322g00014 202 SMART rav1_2 100 162 IPR001471 GO:0003700|GO:0006355
Gabi2322g00014 202 MobiDBLite consensus disorder prediction 74 94 - -
Gabi2322g00014 202 Gene3D AP2/ERF domain 99 157 IPR036955 GO:0003700|GO:0006355
Gabi2322g00014 202 PRINTS Ethylene responsive element binding protein signature 138 158 IPR001471 GO:0003700|GO:0006355
Gabi2322g00014 202 PRINTS Ethylene responsive element binding protein signature 99 110 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2322g00014 Gabi-Chr2322 203027 203635 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2322g00014 100 201 AP2-EREBP Transcription Factor Family AT2G44840 64.706 2.55e-41 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gabi2322g00014 AP2 4.1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2322g00014 K09286 - qsa:O6P43_026942 168.318