Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2322g00011 ATGGTTGAGAGGTCCATGGAACTTGAAGCTATTAGCAAGGAAGCTGTTGATCTGGAGAACATTTCTCTTGAGGAGGTTTTTGATAATCTTAAATGCACAAGAGAAGGTTTAAGCTCCGAGCAAGTACAAGCAAGGCTAGACTTGTTTGGATACAATAAGCTTGAAGAAAAGAAGGAAAGTAAGATACTGAAGTTTTTGGGCTTTATGTGGAATCCTCTGTCATGGGTTATGGAAGCTGCTGCTATCATGGCTATAGCTATGGCACATGGAGGGGGAGAACCTCCAGATTATCAAGATTTTGCTGGCATAATTATTTTGCTAGTTATCAACTCTACCATCAGTTTCATAGAAGAAAATAATGCTGGTAATGCAGCTGCAGCCCTTATGGCCAGATTGGCCCCAAAAGCAAAGGTACTCCGTGATGGAAAATGGAGTGAAGAAGATGCTTCAGTGTTGGTTCCTGGAGACATAATTAGCATCAAGCTTGGTGATATCATTCCTGCAGATGCACGTCTCCTTGAAGGAGATCCTTTGAAGATTGACCAGTCTGCTCTTACTGGAGAGTCACTTCCTGTCACTAAACATCCCGGAGAAGGAGTATATTCTGGTTCAACTTGCAAGCAAGGAGAAATAGAAGCAGTAGTTATTGCTACTGGAGTTCACACTTTTTTTGGCAAGGCAGCTCATCTTGTGGAAAATACAACACATGTTGGACATTTCCAGAAGGTTCTTACATCTATTGGGAATTTCTGCATTTGTTCAATTGCTATTGGGATGGTTATTGAAATCATTGTGATATATGGGATCCAGAAAAGGGGATATAGGGTTGGTATTGATAACCTCCTTGTGCTCTTAATTGGGGGGATCCCTATTGCAATGCCAACTGTCCTTTCTGTTACAATGGCTATTGGTTCACATAGGTTGTCTCAGCAGGGTGCCATAACAAAGAGAATGACTGCTATTGAAGAAATGGCTGGAATGGATGTGTTATGTAGTGACAAAACAGGCACATTAACTCTTAACAAGCTTACAGTGGACAAGAATATGATTGAGGTTTTTGCCAAAGGTGTTGACAAGGATATGGTTGTACTTATGGCTGCAAGAGCATCAAGGCTAGAGAACCAGGATGCAATTGATGGTGCAATTGTTTCAATGTTGGCAGACCCAAAGGAGGCACGAGCTGGAATAAAAGAAGTTCACTTCCTTCCATTCAATCCAACTGATAAAAGAACTGCACTTACATACATTGAAGCTGCTGGCAAGATGAACAGGGTTAGCAAAGGTGCACCAGAGCAGATTCTCAATCTTTCTAACAACAAATCAGAAATTGCACAGAAGGTTCATGCAATTATAGACCAATTTGCAGAACGTGGACTTCGTTCTCTTGCAGTTGCACGCCAGGAAGTACCTGAGGGGAATAAAGACAGTCCAGGAGGACCCTGGGAATTTGTTGGCCTTCTCCCTCTTTTTGACCCTCCTCGCCATGATAGTGCAGAAACAATCAGAAGAGCTCTTGATCTTGGTGTGAGTGTCAAAATGATTACTGGTGATCAACTTGCAATCGGGAAGGAAACAGGAAGGCGTCTAGGGATGGGAACTAACATGTATCCTTCTTCATCACTGCTTGGTGAAAAAAAAGATGGATTAGGTGCTGTCTCCATTGATGAGCTCATTGAGAATGCTGATGGTTTTGCTGGTGTCTTTCCTGAGCACAAGTATGAGATTGTGAAGAGGTTACAAGCTAGGAAGCACATTTGTGGGATGACTGGTGATGGGGTGAATGATGCACCTGCCCTAAAGATAGCTGACATAGGTATTGCAGTAGCAGATTCTACAGATGCTGCAAGAAGTGCTTCTGACATAGTACTAACAGAACCTGGGTTAAGTGTGATCATAAGTGCAGTTTTAACTAGCCGTGCAATTTTCCAGAGAATGAAAAACTACACAATATATGCTGTATCTATCACTATTCGTATTGTGTTGGGTTTCATGTTACTGACCTGCTTTTGGAGATTTAACTTTCCCCCCTTTATGGTTCTAATCATTGCCATTCTCAATGATGGTACCATCATGACAATATCTAAAGACAGGGTTAAGCCTTCTCCAACTCCTGATAGTTGGAAGCTTAGTGAAATTTTTGCAACTGGGGTTGTTCTTGGAAGCTATCTTGCTCTAATGACTGTGATCTTCTTCTTGGTTGTTTATGAAACAAACTTCTTTCCTGTAAGGTTCCGCGTCAATACAGATGATCCTGTTACTGATGAAGTGAAAGAAATGTTGGGATCTGCTGTCTATCTTCAAGTCAGCACAATTAGTCAAGCCTTAATTTTTGTTACACGCTCCAGGGGTTGGTCCTACACAGAAAGACCTGGTCTTTTGCTTGTTATTGCCTTCATAATTGCTCAGCTGGTTGCAACTGTTATATCTGCCAAAGTCACATGGAAAACTGCTGGAATTAGAAGTATAGGTTGGGGCTGGACAGGAGTCATATGGTTGTTCAATACTGTAACTTATGTACTTCTGGATCCTTTAAAGTTTGCTGTTCGTTATGCATTAAGTGGAAGGGCTTGGAATCTGGTGGTCAACCAAAGAACTGCATTCATCAACAAAAATGACTTTGGTAGAGAAGCACGTGAGGCTGCATGGGCTGCTGAGCAGAGAACCTTGCATGGCCTCCATTCTGTTGAGTCAAAAGTGATGGCAGAGAAGCACACATTCAGAGAAATAAATACATTGGCAGAAGAAGCTAGGAGGAGAGCAGAGATAGCAAGGTTGAGAGAGCTTTACACTCTGAAAGGAAGAGTGGAATCCTTTGCCAAGCTAAGGGGTTTGGATATTGATAATGTGAACGGGCACTATACTGTCTAA 2868 0.4202 MVERSMELEAISKEAVDLENISLEEVFDNLKCTREGLSSEQVQARLDLFGYNKLEEKKESKILKFLGFMWNPLSWVMEAAAIMAIAMAHGGGEPPDYQDFAGIIILLVINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKHPGEGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVENTTHVGHFQKVLTSIGNFCICSIAIGMVIEIIVIYGIQKRGYRVGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNMIEVFAKGVDKDMVVLMAARASRLENQDAIDGAIVSMLADPKEARAGIKEVHFLPFNPTDKRTALTYIEAAGKMNRVSKGAPEQILNLSNNKSEIAQKVHAIIDQFAERGLRSLAVARQEVPEGNKDSPGGPWEFVGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGEKKDGLGAVSIDELIENADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKIADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLTCFWRFNFPPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLSEIFATGVVLGSYLALMTVIFFLVVYETNFFPVRFRVNTDDPVTDEVKEMLGSAVYLQVSTISQALIFVTRSRGWSYTERPGLLLVIAFIIAQLVATVISAKVTWKTAGIRSIGWGWTGVIWLFNTVTYVLLDPLKFAVRYALSGRAWNLVVNQRTAFINKNDFGREAREAAWAAEQRTLHGLHSVESKVMAEKHTFREINTLAEEARRRAEIARLRELYTLKGRVESFAKLRGLDIDNVNGHYTV 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2322g00011 955 CDD P-type_ATPase_H 36 846 IPR006534 GO:0008553|GO:0016020|GO:0120029
Gabi2322g00011 955 NCBIfam plasma-membrane proton-efflux P-type ATPase 36 810 IPR006534 GO:0008553|GO:0016020|GO:0120029
Gabi2322g00011 955 SFLD C1.7: P-type atpase like 313 640 - -
Gabi2322g00011 955 Pfam E1-E2 ATPase 132 310 - -
Gabi2322g00011 955 Gene3D - 328 626 IPR023214 -
Gabi2322g00011 955 Gene3D - 904 955 - -
Gabi2322g00011 955 Gene3D - 96 819 - -
Gabi2322g00011 955 Gene3D - 134 218 - -
Gabi2322g00011 955 SUPERFAMILY HAD-like 327 636 IPR036412 -
Gabi2322g00011 955 PANTHER CALCIUM-TRANSPORTING ATPASE 19 888 - -
Gabi2322g00011 955 SMART Cation_ATPase_N_a_2 17 89 IPR004014 -
Gabi2322g00011 955 FunFam Plasma membrane ATPase 483 637 - -
Gabi2322g00011 955 NCBIfam HAD-IC family P-type ATPase 103 538 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Gabi2322g00011 955 NCBIfam HAD-IC family P-type ATPase 564 669 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Gabi2322g00011 955 Gene3D - 343 490 IPR023299 GO:0000166
Gabi2322g00011 955 FunFam Plasma membrane ATPase 343 490 - -
Gabi2322g00011 955 PRINTS P-type cation-transporting ATPase superfamily signature 331 345 - -
Gabi2322g00011 955 PRINTS P-type cation-transporting ATPase superfamily signature 507 517 - -
Gabi2322g00011 955 PRINTS P-type cation-transporting ATPase superfamily signature 181 195 - -
Gabi2322g00011 955 PRINTS P-type cation-transporting ATPase superfamily signature 485 496 - -
Gabi2322g00011 955 PRINTS P-type cation-transporting ATPase superfamily signature 589 608 - -
Gabi2322g00011 955 PRINTS P-type cation-transporting ATPase superfamily signature 612 624 - -
Gabi2322g00011 955 SUPERFAMILY Calcium ATPase, transmembrane domain M 17 852 IPR023298 -
Gabi2322g00011 955 Pfam Cation transporter/ATPase, N-terminus 20 83 IPR004014 -
Gabi2322g00011 955 SFLD p-type atpase 313 640 IPR044492 -
Gabi2322g00011 955 PRINTS H+-transporting ATPase (proton pump) signature 447 465 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Gabi2322g00011 955 PRINTS H+-transporting ATPase (proton pump) signature 561 577 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Gabi2322g00011 955 PRINTS H+-transporting ATPase (proton pump) signature 620 645 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Gabi2322g00011 955 PRINTS H+-transporting ATPase (proton pump) signature 589 605 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Gabi2322g00011 955 PRINTS H+-transporting ATPase (proton pump) signature 765 786 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Gabi2322g00011 955 SUPERFAMILY Calcium ATPase, transduction domain A 134 231 IPR008250 -
Gabi2322g00011 955 Pfam haloacid dehalogenase-like hydrolase 327 603 - -
Gabi2322g00011 955 ProSitePatterns E1-E2 ATPases phosphorylation site. 333 339 IPR018303 -
Gabi2322g00011 955 FunFam Plasma membrane ATPase 134 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2322g00011 Gabi-Chr2322 138869 146991 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2322g00011 1 955 Primary Pumps ATPases AT5G62670 79.289 0.0 1528