Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2319g00004 ATGGCAGAGCTAGTCGCTGGGGCATTTCTTTCGTCTCTCTTTCAAGTGACTTTGGAGAGCTTGGCTTGCCGTGATTTCTACCGTAGAAGCAAACGTAAGGCTGTGCTGATGGAAAAACTTGAGTTTACACTTAACTCTATCAACCATGTGCTGGATGATGCAGAGAAAAAGCAGTACCAAAGCGATTCCGTGAAAAAGTGGCTTGATAAACTTAAACATGTTGCTTATGAGACAGACCAACTGTTAGATGAGATTGCTACTGATGCTGCACTCAAGAAGCTCAAGGCTACATCTCATCCAGCTACATGCAAGGTACGAGGCTTCTTTTCAGCCTTTACTAGTAATCCATTTGAATCCAGGATCAGAGAGTTGCTAGAGAACTTAGAATTTCTTGCAAAGCAAAAGGAAACGCTAGGATTGAGAGAAGTCACTCTTGCTAGCAATGAAGGTGACTTTCGTGGGAATCTCTCAAAAAGAATGCCCACCACATCTTTGTTGGATCTATCAAGCATCATATATGGTAGAGACGGGGATAAAGAGCAAATAATCAAATTTTTACTTTCAGACAATGTAAGTGGCAATCAGATTCCCATGATTAGTATAGTGGGCATCGGTGGAATGGGTAAGACCACCCTTGCTCAGCTTGTGTACAATGACCAAAGGTTGCAGGAGCAGTTTGAACTTAAAGCTTGGGTCTATGTTTCAGAACATTTTGATGTTGTTGGAGTCACAAAGGCAATTCTCAAATCATTTCATTGTTCAGCAGATGTTGAAGACTTGAATAGACTCCAACTCGAATTGCAAAAGAAATTAATCGGCAAGAAGTATTTGATTGTTCTTGACGATCTTTGGAATGAGGATTGGGCAAGTTGGGAGGTCTTAAAAGTTCCCCTTAACTATGGATCTTTCGGAAGTCGGATCATTGTCACAACACGTAATAAGAAGGTAGCAACAGTCATGAAATCCACCCAACTGCTTCCTTTGAAGGAATTGGAGGAAAATGATTGTTGA 1011 0.4115 MAELVAGAFLSSLFQVTLESLACRDFYRRSKRKAVLMEKLEFTLNSINHVLDDAEKKQYQSDSVKKWLDKLKHVAYETDQLLDEIATDAALKKLKATSHPATCKVRGFFSAFTSNPFESRIRELLENLEFLAKQKETLGLREVTLASNEGDFRGNLSKRMPTTSLLDLSSIIYGRDGDKEQIIKFLLSDNVSGNQIPMISIVGIGGMGKTTLAQLVYNDQRLQEQFELKAWVYVSEHFDVVGVTKAILKSFHCSADVEDLNRLQLELQKKLIGKKYLIVLDDLWNEDWASWEVLKVPLNYGSFGSRIIVTTRNKKVATVMKSTQLLPLKELEENDC 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2319g00004 336 FunFam Probable disease resistance protein At1g61300 156 324 - -
Gabi2319g00004 336 Coils Coil 121 141 - -
Gabi2319g00004 336 PRINTS Disease resistance protein signature 270 284 - -
Gabi2319g00004 336 PRINTS Disease resistance protein signature 198 213 - -
Gabi2319g00004 336 Pfam NB-ARC domain 176 336 IPR002182 GO:0043531
Gabi2319g00004 336 Pfam Rx N-terminal domain 10 96 IPR041118 -
Gabi2319g00004 336 PANTHER DISEASE RESISTANCE PROTEIN RP 37 336 IPR044974 GO:0006952
Gabi2319g00004 336 Coils Coil 37 57 - -
Gabi2319g00004 336 Gene3D - 156 326 IPR027417 -
Gabi2319g00004 336 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 336 IPR027417 -
Gabi2319g00004 336 Gene3D - 17 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2319g00004 Gabi-Chr2319 35081 37478 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2319g00004 172 332 WRKY Transcription Factor Family AT4G12020 27.273 2.57e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2319g00004 - - mtr:11414856 400.979