Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2315g00023 ATGGCTTCCGCAGCGGCTCCACAGGTTCTGTTATACAATCCCATCTTAGGAAATAATCGAGCAAGAGGAGTAAGGTTTTTGAGGGCAGGAACCACAAACACTCATTACAGTAGTACTCTTGTGCAGCCTGTTCAAGCCTCGCAGGGTCGAGCACCTCCTCCTGGTGTTGACACAAGAATCCATTGGGACAACCAAGATGAAGGTTGGATTGGAGGTACTAACACTGAAAAACACCAACAAAACAGTGCAGAGCAGAAACCCAAGAACCTCTTGGGTGAAAAGTTTGCTGATTTGCTCACCGCTTCTTCAGGTTCTCATTACGAATTCTTAGGAGTATCAGCAGATGCGGATTTAGAAGAAATTAAAGTAGCTTACCGGAGACTATCGAAGGAGTACCATCCAGACACAACTTCCCTCCCACTAAAAACTGCCTCAGAAAAATTCATGAAATTAAGAGAGGTTTACAATGTTCTTAGCAAAGAAGAAAGTCGAAGATTTTATGATTGGACCCTTGCTCAAGAGGCTGCAAGCCGCCAAGCAGAGAAGATGAAAATGAGACTGGAGGATCCTTATGAGCAACAGGTCAATAACTGGGAATCTGTTCCAGACATGGTTGACCGCCTTGGTGGAAAGAATATGGAGCTTAGCGATCAAGCAGTTTCTGCAATCACTATTGATGTTTTTATCATCATTTTTTCTATATGTTGCATCATCTATGTAATATTCTTTAAAGTACCATATTACTAG 747 0.4244 MASAAAPQVLLYNPILGNNRARGVRFLRAGTTNTHYSSTLVQPVQASQGRAPPPGVDTRIHWDNQDEGWIGGTNTEKHQQNSAEQKPKNLLGEKFADLLTASSGSHYEFLGVSADADLEEIKVAYRRLSKEYHPDTTSLPLKTASEKFMKLREVYNVLSKEESRRFYDWTLAQEAASRQAEKMKMRLEDPYEQQVNNWESVPDMVDRLGGKNMELSDQAVSAITIDVFIIIFSICCIIYVIFFKVPYY 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2315g00023 248 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT T, CHLOROPLASTIC 1 247 IPR044618 -
Gabi2315g00023 248 SUPERFAMILY Chaperone J-domain 103 174 IPR036869 -
Gabi2315g00023 248 ProSiteProfiles dnaJ domain profile. 105 171 IPR001623 -
Gabi2315g00023 248 CDD DnaJ 106 159 IPR001623 -
Gabi2315g00023 248 Gene3D DnaJ domain 95 192 IPR036869 -
Gabi2315g00023 248 FunFam DnaJ homolog subfamily C member 4 94 192 - -
Gabi2315g00023 248 PRINTS DnaJ domain signature 125 140 IPR001623 -
Gabi2315g00023 248 PRINTS DnaJ domain signature 107 125 IPR001623 -
Gabi2315g00023 248 PRINTS DnaJ domain signature 143 163 IPR001623 -
Gabi2315g00023 248 Pfam DnaJ domain 106 168 IPR001623 -
Gabi2315g00023 248 SMART dnaj_3 104 163 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2315g00023 Gabi-Chr2315 160954 161940 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2315g00023 106 173 C2H2 Transcription Factor Family AT1G74250 37.500 2.95e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2315g00023 K23051 - qsa:O6P43_001846 324.324