Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2306g00008 ATGGAGGGTAAGGATGAAGATGTGAGAGTAGGAGCCAACAGGTATAGAGAGAGGCAACCAATAGGAACTGCTGCTCAGGCTCAAGATACCAAAGACTACAAAGAGCCGCCTTCAGCACCTCTCTTCGAGCCTAGTGAGTTGTCATCATGGTCTTTCTACAGAGCAGGCATAGCAGAATTTGTGGCCACGTTCTTGTTTCTTTATATCACAGTTTTAACAGTGATGGGTGTGTCCAAATCCAACAACAAGTGTTCCACTGTAGGTGTCCAAGGCATAGCTTGGGCATTTGGTGGAATGATCTTTGCTCTTGTTTATTGCACTGCTGGCATCTCAGGGGGTCACATTAACCCAGCAGTGACATTTGGCCTGTTTTTGGCACGCAAGCTCTCTCTAACTAGGACAGTATTTTACATAATCATGCAGTGCTTGGGAGCTATCTGTGGTGCTGGTGTAGTTAAGGGGTTTCAACCACACCAGTATGAGAGGCTAGGTGGTGGTGCCAATACTCTAAGTAAAGGATACTCCAAAGGTGATGGCCTTGGAGCAGAGATTGTTGGCACATTTGTGCTTGTTTATACTGTCTTCTCTGCCACTGATGCCAAGAGAAATGCTAGGGACTCCCACGTTCCTATTTTGGCACCATTGCCTATTGGTTTTGCCGTTTTCCTGGTGCATTTGGCTACAATTCCTGTTACAGGAACTGGTATCAACCCAGCTAGAAGCCTTGGTGCAGCCCTTATATACAACAGGGACCAAGCTTGGGATGACCATGTGATGGATTTTTTGGGTAGGACCTTTCACTGGTGCAGCACTTGCAGCTTTGTACCATCAGATAGTAATCAGGGCCATACCCTTCAAGTCAAAGTGATGCAACATTGA 879 0.4642 MEGKDEDVRVGANRYRERQPIGTAAQAQDTKDYKEPPSAPLFEPSELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSNNKCSTVGVQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRTVFYIIMQCLGAICGAGVVKGFQPHQYERLGGGANTLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPVTGTGINPARSLGAALIYNRDQAWDDHVMDFLGRTFHWCSTCSFVPSDSNQGHTLQVKVMQH 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2306g00008 292 MobiDBLite consensus disorder prediction 1 37 - -
Gabi2306g00008 292 Pfam Major intrinsic protein 46 261 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi2306g00008 292 ProSitePatterns MIP family signature. 114 122 IPR022357 -
Gabi2306g00008 292 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 13 264 IPR034294 -
Gabi2306g00008 292 PRINTS Major intrinsic protein family signature 218 240 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi2306g00008 292 PRINTS Major intrinsic protein family signature 182 200 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi2306g00008 292 PRINTS Major intrinsic protein family signature 96 120 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi2306g00008 292 PRINTS Major intrinsic protein family signature 133 152 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi2306g00008 292 PRINTS Major intrinsic protein family signature 54 73 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi2306g00008 292 FunFam Probable aquaporin PIP1-2 39 273 - -
Gabi2306g00008 292 CDD MIP 54 257 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi2306g00008 292 Gene3D Glycerol uptake facilitator protein. 39 276 IPR023271 -
Gabi2306g00008 292 NCBIfam MIP family channel protein 58 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi2306g00008 292 SUPERFAMILY Aquaporin-like 46 257 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2306g00008 Gabi-Chr2306 151054 153767 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2306g00008 1 291 Major Intrinsic Protein MIP AT2G45960 80.756 0.0 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2306g00008 K09872 - cave:132192212 494.582