Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2306g00003 ATGCCTTCATCTTCAACAACCTTAATCTCCAAATGCACAATCTACCCAGACCAGAAATCAACCATGAAAACCCTTAAGCTCTCTGTTTCTGATCTTCCAATGTTGTCTTGTCACTACATCCAAAAGGGTGTGTTACTCAGTGCCCCACCCTACTCCTTCGACAACCTGATTCTTTCTCTCAAGCAATCCCTCTCCGCCGCACTCTCCCACTTCCCCGCCCTCGCCGGCCGCCTCTACACCGACGCCGACGGTTACGTCCACATCCTCTGCAACGACGCCGGCGCCGATTTCATTCACGCCAAAGCCAAACACCTTACCTTAAACGCCGTCGTTTCACCCTCCCTCGTTGATGTTCACCCTTCCTTCAAGGAGTTCTTCGCCTACGACATGACTATTTCCTACTCCGGCCACCACCAACCCCTCGCCGCCATCCAGGTCACCGAGCTCGCCGACGGCGTCTTCGTCGGCTGCACCGTCAACCACGCCGTCACCGACGGCACCTCCTTGTGGCACTTCTTCAACACCTTCGCCGCCATAACCAAGGGTGGCGGCGGCGGCGCAGCCAAGAAAATCCTCAGGTCACCGGACTTCACCCGCGACACAGTCTTCAACTCCGCCGCCGTTCTCTCCGTCCCAGCCGGCGGCCCGACCGTCACCTTCGACGCCGACGAGCCTCTCCGGGAGCGCGTCTTCCACTTCTCGCGCGAGGCCATTCAGAGACTGAAACAGAAAGCCAACTGTAACGAATTCCCGGATTCCGCGGAGGTAATGGGAAAACAGGTGAATGACGGTTGGAAAACCGTCAACGGTAACGTCAACGGCAAGATAACGCCCGTTGTTAACGGTAACAGGAGGAACGAGATCTCGTCGTTTCAATCGTTATCTGCTCAGCTATGGCGTTCTGTTACACGTGCCAGGAAATTGAATTCCACCAAAACGTCGACGTTCCGCATGGCTGTGAATTGCCGCCACAGGTTGGAACCAAAGATGGACTCGTTTTACTTCGGCAATGCGATTCAGAGCATCCCAACCGTTGCTTCGGTTGGTGACATACTCTCTCGCGATCTACGCTTCTGCGCCGAATTGCTTCACCAAAACGTCGTCGCACACGACGACGCTACGGTGCGCCGCGGCGTAGAGGATTGGGAGAAGGCTCCGAGGCTGTTTCCGCTTGGGAACTTCGACGGCGCAATGATCACCATGGGTAGCTCCCCGCGTTTTCCCATGTACGACAACGATTTCGGGTGGGGCCGACCCTTGGCGATTCGGAGCGGAAAAGCGAACAAGTTTGACGGCAAGATCTCTGCGTTTCCTGGAAGAGAAGGAAACGGCAGCGTTGATCTTGAGGTCGTTTTGGCACCTGAAACGATGGCGGGACTCGAAAACGACATGGAGTTTATGCAGTACGTAACGCTGGCCGTGTGA 1425 0.5579 MPSSSTTLISKCTIYPDQKSTMKTLKLSVSDLPMLSCHYIQKGVLLSAPPYSFDNLILSLKQSLSAALSHFPALAGRLYTDADGYVHILCNDAGADFIHAKAKHLTLNAVVSPSLVDVHPSFKEFFAYDMTISYSGHHQPLAAIQVTELADGVFVGCTVNHAVTDGTSLWHFFNTFAAITKGGGGGAAKKILRSPDFTRDTVFNSAAVLSVPAGGPTVTFDADEPLRERVFHFSREAIQRLKQKANCNEFPDSAEVMGKQVNDGWKTVNGNVNGKITPVVNGNRRNEISSFQSLSAQLWRSVTRARKLNSTKTSTFRMAVNCRHRLEPKMDSFYFGNAIQSIPTVASVGDILSRDLRFCAELLHQNVVAHDDATVRRGVEDWEKAPRLFPLGNFDGAMITMGSSPRFPMYDNDFGWGRPLAIRSGKANKFDGKISAFPGREGNGSVDLEVVLAPETMAGLENDMEFMQYVTLAV 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2306g00003 474 Gene3D - 6 211 IPR023213 -
Gabi2306g00003 474 SUPERFAMILY CoA-dependent acyltransferases 59 182 - -
Gabi2306g00003 474 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 8 468 - -
Gabi2306g00003 474 Pfam Transferase family 7 467 - -
Gabi2306g00003 474 Gene3D - 213 463 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2306g00003 Gabi-Chr2306 52177 54070 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2306g00003 60 462 Monolignol Biosynthesis Gene Families AT5G48930 27.529 4.79e-33 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2306g00003 - - gmx:100780358 792.727