Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2303g00009 ATGGGAAAGAAGAGAACTAGGGTTTCCGACGATGAGGAAATCGAATCTGACCTCAACCGTCACAATCACGAAGAAAACAACACCCTCTACCAGGTTCTTGGTGTAGAGAGAACAGCGTCTCAACAGGAAATAAAGAAGGCATACTACAAGTTGGCATTGAGGCTGCATCCTGATAAGAACCCTGGTGATGAGGAAGCGAAAGCAAAGTTTCAGCAATTGCAAAACGTTATCTCAATTCTTGGGGATGAGGAAAAACGGGCCCTTTATGATCAGACTGGTTGTGTTGATGATGCTGACCTTGCAGGAGATGTTGTTCAGAACCTTAAAGAGTATTTCAGAGCAATGTACAAGAAGGTCACTGAAGCTGATATTGAGGAGTTTGAAGCGAACTATAGGGGATCTGACTCTGAGAAAAATGATTTGATTGGTCTGTACAAGAAGTGCAAGGGTAATATGAACAGGTTATTCTGTTCAATGTTGTGTTCGGATCCTAAACTTGACTCACACCGATTCAAGGATATTCTTGATGAGGCTATGGCTACTGGAGAACTAAAGGAAACAAAAGCCTACAAGAAGTGGGCAAAGAAAATATCAGAAACCAAACCACCAACTAGTCCTTTAAGGAGGGCAAAATCAAATAAGAAATCAGAAACAGATCTGTATGCTATTATATCACAACGTCGATGTGAGAGGAAGGACCAGTTTGATTCTATGTTCTCATCTCTAGTTTCAAAATATGGTGGAGGTCATATGCCAGAACCGTCTGAAGAGGAATTTGAAACTGCACAGAGAAAGCTGGAAAGCCGAAGGTCCTCAAAAAAGTCAAAGCGAAAGTAA 837 0.4146 MGKKRTRVSDDEEIESDLNRHNHEENNTLYQVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKAKFQQLQNVISILGDEEKRALYDQTGCVDDADLAGDVVQNLKEYFRAMYKKVTEADIEEFEANYRGSDSEKNDLIGLYKKCKGNMNRLFCSMLCSDPKLDSHRFKDILDEAMATGELKETKAYKKWAKKISETKPPTSPLRRAKSNKKSETDLYAIISQRRCERKDQFDSMFSSLVSKYGGGHMPEPSEEEFETAQRKLESRRSSKKSKRK 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2303g00009 278 PRINTS DnaJ domain signature 30 48 IPR001623 -
Gabi2303g00009 278 PRINTS DnaJ domain signature 48 63 IPR001623 -
Gabi2303g00009 278 PRINTS DnaJ domain signature 85 104 IPR001623 -
Gabi2303g00009 278 PRINTS DnaJ domain signature 65 85 IPR001623 -
Gabi2303g00009 278 CDD DnaJ 28 82 IPR001623 -
Gabi2303g00009 278 MobiDBLite consensus disorder prediction 246 278 - -
Gabi2303g00009 278 SUPERFAMILY Chaperone J-domain 24 100 IPR036869 -
Gabi2303g00009 278 Pfam DnaJ domain 29 90 IPR001623 -
Gabi2303g00009 278 MobiDBLite consensus disorder prediction 251 268 - -
Gabi2303g00009 278 ProSiteProfiles dnaJ domain profile. 28 93 IPR001623 -
Gabi2303g00009 278 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 20 278 IPR042977 -
Gabi2303g00009 278 MobiDBLite consensus disorder prediction 1 25 - -
Gabi2303g00009 278 SMART dnaj_3 27 85 IPR001623 -
Gabi2303g00009 278 Gene3D DnaJ domain 13 117 IPR036869 -
Gabi2303g00009 278 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2303g00009 Gabi-Chr2303 234275 237232 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2303g00009 30 90 C2H2 Transcription Factor Family AT1G74250 40.909 4.92e-09 55.1