Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2301g00012 ATGCAGAATCCAGGGGAGCAGGGTAAAGCGCCACTCAGAATAACTGACATGGAACAGCCACCCCGCCGCATGCGACGGAGCCGTGGTTTCCTTGCTGGATTCAGGAATCCTGAGCCTCAACAGTACCACCACCAACGACAACGACAGCAACAAGTAAACGAACTACAAACGCGGGTGACTCAACTCATGGACTTCGACAAGGCCTATTTCGATCAATACGCTCACCTTAGCGTCCATGAAGAGATGCTCAAGGATCGTGTGCGGACGGAGGCATATAAAGCTGCAATCATGCATCATCAGGCTTTTATTTCAGGCAAAGTTGTACTTGATGTTGGATGCGGTACTGGCATCCTTTCTATATTTTGTGCTCAGGCTGGTGCAAAGCGGGTGTATGCAGTTGAAGCAAGCAACATTGCTCTGCAGGCTAGAAGGGTAGTTGAAGCAAATAATCTTTCAAATGTTGTCATTGTATTGCATGGACGAGTTGAGGATCTTGAACTCAGTGAAAAGGTTGATGTTATAATTTCAGAATGGATGGGTTATATGCTTCTATATGAGAGCATGCTTGGAAGTGTTATCACTGCCAGAAATCGCTGGCTCAAACGTGGAGGTCTAATTCTTCCTTCAATTGCAAGGTTGTACATGGCTCCTTTCACACATCCTAGCAGATACAGTGAAAGCATTGACTTTTGGCGCAATGTTTATGGAATTGATATGTCCGCTATGATGCCGTTAGCAAAACAGTGTGCATTTGAAGGACCTTCCGTGGAGACAATTACATGTGAAAATGTTTTGACATGGCCTCTTTTGGTGAAATATATCAACTGTTATTATATTACAATTCCTGAGCTAGAATCTATAACAGAAAGTTTTAAGTTCAAATCAATGATGCAAGCGCCATTACATGGTTTTGCATTTTGGTTTGATGTTGAATTTACTGGGCCTATACTATCACCAATGCCAATCAATTTTCAGTTCTCATCTACATATGTTGACAACCATCCAGTGGATGATAATCAGAGAAAAAGACGGACAAATCCTAATGAAGAACTGCGCCTATCCACCTCGCCTGAAGACCCTCCAACACATTGGCATCAGACCTTGATATACTTATATGATCCAATAGAGCTGAAACAGGATCAACTTATTGAAGGATCAGTGACATTGTCACATAGCCAAAAAGATGGCCGGTTTATGAACATTCACCTTGAATATACTTCAGGTGGTCGATCCTACGTGAAAGAGACTGTTATGAGATGA 1260 0.427 MQNPGEQGKAPLRITDMEQPPRRMRRSRGFLAGFRNPEPQQYHHQRQRQQQVNELQTRVTQLMDFDKAYFDQYAHLSVHEEMLKDRVRTEAYKAAIMHHQAFISGKVVLDVGCGTGILSIFCAQAGAKRVYAVEASNIALQARRVVEANNLSNVVIVLHGRVEDLELSEKVDVIISEWMGYMLLYESMLGSVITARNRWLKRGGLILPSIARLYMAPFTHPSRYSESIDFWRNVYGIDMSAMMPLAKQCAFEGPSVETITCENVLTWPLLVKYINCYYITIPELESITESFKFKSMMQAPLHGFAFWFDVEFTGPILSPMPINFQFSSTYVDNHPVDDNQRKRRTNPNEELRLSTSPEDPPTHWHQTLIYLYDPIELKQDQLIEGSVTLSHSQKDGRFMNIHLEYTSGGRSYVKETVMR 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2301g00012 419 MobiDBLite consensus disorder prediction 335 349 - -
Gabi2301g00012 419 FunFam Protein arginine N-methyltransferase 6 62 208 - -
Gabi2301g00012 419 FunFam Protein arginine N-methyltransferase 6 210 417 - -
Gabi2301g00012 419 Gene3D Vaccinia Virus protein VP39 63 208 IPR029063 -
Gabi2301g00012 419 CDD AdoMet_MTases 108 213 - -
Gabi2301g00012 419 Gene3D - 210 418 - -
Gabi2301g00012 419 MobiDBLite consensus disorder prediction 333 359 - -
Gabi2301g00012 419 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 50 407 IPR025799 GO:0016274|GO:0018216
Gabi2301g00012 419 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 73 409 IPR029063 -
Gabi2301g00012 419 MobiDBLite consensus disorder prediction 1 23 - -
Gabi2301g00012 419 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 66 419 IPR025799 GO:0016274|GO:0018216
Gabi2301g00012 419 Pfam Ribosomal protein L11 methyltransferase (PrmA) 104 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2301g00012 Gabi-Chr2301 48464 58891 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2301g00012 69 386 C2H2 Transcription Factor Family AT3G12270 37.538 5.23e-62 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2301g00012 K11437 - rcu:8260730 568.926