Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2296g00027 ATGGGCTGGCCCTACATAGGAGAGACATTCAAGCTCTACACTCAAAACCCAAATACCTTCTTCTCCAACAGGCAAAAAAGGTATGGAGATATCTTTAAGACTCGCATACTTGGTTATCCTTGTGTAATGATTTCAAGCCCAGAGGCAACGAGAACTGTGCTTGTGACTCAAGCACATCTGTTCAAACCAACATACCCTGCAAGCAAAGAGAAAATGATAGGTCCAGAGGCTGTTTTCTTTCAACAGGGTGATTATCACTCCATGCTCAAGAAGTTGGTTCAGGCCACTTTTTTGCCCTCTGCAATTAAAAAATCAGTCTTTGAAGTTGAGCAAATTGTCCTTAAATTGTTGCCAACTTGGAACAACACAACCATCAATGCCTTACAAGAGATGAAGAGGTATGCTTTCAAGGTAGCTGCTATCTCAGCCTTCGGTGAAATAATGGAGCTTGAAATGGAAGAAATTGAATACCTGTATCGGTGCTTGGAAAAGGGCTACAATTCCTTTCCTTTATATGTTCCTGGAACCTCCTATTGGAAATCAATGAAGGCAAGGAAGCTTCTGAATGAAACTATAAGGAGATTAATACATAAAAGAAGGGAAAGTGGGAACTATGGAGGAGGGTTGTTGGGAGTATTGTTGAGAGCTAGAGGTAACAAAATGTACCAGCTCACTGATTTTCAGATTGCTGATAACCTCATAGGAGTGATCTTTGCTGCACATGATACCACTGCTAGTGTTCTTACATGGGTTCTCAAGTATTTGCATGACAATGTCACTCTCTTGGAAGCTGTCACGGAAGAGCATGAAGGAATTAAAAGGAAACTAGTTATAGAAAATCGTGGCCTTACATGGGAAGATACCAGGCAGATGCCACTCTCTGGAAGGGTTATCCAAGAAACACTGAGAAGTGCAAGCATACTGTCATTTACATTCAGAGAAGCTGTTCAAGATGTTGAGCTCCAAGGTTACTCTATTCCAAAAGGTTGGAAGGTCCTTCCCCTTTTCAGAAGCATTCATCATTGTGCTGATTTCTTCCCTCAACCAGAGAAGTTTGACCCTTCCAGATTCGAGGTGCCACCGAGACCAAACACATATATGCCATTTGGAAATGGAGTCCACTCTTGTCCAGGCAGTGAGCTTGCTAAGCTTGAGGTGCTTGTCCTCCTCCACCACCTCACTGTTTCTTACAGGTGGCACGTTACGGAAAATGAAGATGGAATACAGTACGGTCCTTTTCCTGTGCCCAAACATGGACTGCCAATAAAGATAACACCAAAAGGAACAAAATAG 1293 0.4254 MGWPYIGETFKLYTQNPNTFFSNRQKRYGDIFKTRILGYPCVMISSPEATRTVLVTQAHLFKPTYPASKEKMIGPEAVFFQQGDYHSMLKKLVQATFLPSAIKKSVFEVEQIVLKLLPTWNNTTINALQEMKRYAFKVAAISAFGEIMELEMEEIEYLYRCLEKGYNSFPLYVPGTSYWKSMKARKLLNETIRRLIHKRRESGNYGGGLLGVLLRARGNKMYQLTDFQIADNLIGVIFAAHDTTASVLTWVLKYLHDNVTLLEAVTEEHEGIKRKLVIENRGLTWEDTRQMPLSGRVIQETLRSASILSFTFREAVQDVELQGYSIPKGWKVLPLFRSIHHCADFFPQPEKFDPSRFEVPPRPNTYMPFGNGVHSCPGSELAKLEVLVLLHHLTVSYRWHVTENEDGIQYGPFPVPKHGLPIKITPKGTK 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2296g00027 430 Gene3D Cytochrome P450 1 426 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2296g00027 430 PRINTS E-class P450 group IV signature 376 394 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2296g00027 430 PRINTS E-class P450 group IV signature 360 376 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2296g00027 430 PRINTS E-class P450 group IV signature 230 256 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2296g00027 430 PRINTS E-class P450 group IV signature 291 307 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2296g00027 430 PRINTS E-class P450 group IV signature 19 42 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2296g00027 430 SUPERFAMILY Cytochrome P450 2 426 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2296g00027 430 PANTHER CYTOCHROME P450 26 1 416 - -
Gabi2296g00027 430 FunFam Abscisic acid 8 1 426 - -
Gabi2296g00027 430 Pfam Cytochrome P450 3 405 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2296g00027 430 PRINTS P450 superfamily signature 367 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2296g00027 430 PRINTS P450 superfamily signature 239 256 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2296g00027 430 PRINTS P450 superfamily signature 296 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2296g00027 430 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2296g00027 430 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 369 378 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2296g00027 Gabi-Chr2296 175276 178484 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2296g00027 1 421 Cytochrome P450 AT3G19270 58.531 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2296g00027 K09843 - gmx:100782541 709.138