Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi2296g00019 | ATGTCCATTTTCTGGAACTTACTCTTTTACTGCCTCCTCACCACAGTTTCCACGGGAAGAGAATATTCCGGCAAAGAGACACCGCAGCAGGAGGCTGATAGAGTGAAGAACTTGCCCGGACAACCACCTGTGAAATTCAGACACTACGCTGGTTATGTGAAGCTAAGACCGCATGAAGAGAAGGCACTGTTCTACTGGTTCTTTGAAGCTCAAGAAGCACCCTCTCAAAAGCCTCTTTTGCTTTGGCTTAACGGAGGACCTGGTTGCTCCTCCATTGGCTATGGAGCTGCACGAGAGCTGGGTCCATTTCTTGTTAAAGACAAAGAACGCCTCAAACTTAACAAATTCTCTTGGAACAGAGCTGCAAATATCATATTCTTGGAGTCCCCAGTTGGTGTGGGATTTTCTTACACTAACAACTCCAAAGATTTACAAGAGCTCGGGGATCGAGTGACTGCAATTGATAACTATGCCTTCTTGATTGGTTGGTTCAAAAGGTTCCCAAGCTTCAGATCCCATGACTTTTATATTGCAGGAGAGAGCTATGCAGGTCATTATGTTCCACAGCTTGCTGAGGTCATCTATGAAGGAAACAAAGATACCAAAAAGGGTTCTTACATAAATCTCAAGGGATTCATGGTGGGAAATGCTGTAATGAATGATGTTACAGATGTAAAAGGAATAATTGATTATGCTTGGAGCCATGCCATCATATCAGACCAAGAATACTATGGGATAGTAAAAGATTGTGACTTCAGCAAAGAAAACAAATCAAAGGCTTGCGAAATGCGAGTAGGAGGGTTATTAGAAGCTTACTCGGAGATTGACATATATAGCATTTATTCACCAATTTGCATCAGTGACTATCAAAGAGCAGTTTCAGCCAAACTTCTTGTTGCTCCTCACCTTCTCACATCACATGACCTATGGCATACGCTACCGGCAGGATACGATCCTTGTACAGAGGATTATATAGACAAATATTTCAATAATGAGGATGTTCAGAAGGCTCTACATGCCAATATCACCAACTTGTCATATCCCTATACCCTTTGCAGCGCTGTAATTAGGAAATGGAATGATTCACCAAACACAGTTCTGCCAGTTATTAAGAAGCTCTTACATGCCGGTTTACGCATTTGGATCTATAGTGGGGACACGGATGGTAGAGTTCCAGTGACATCAACAAGATACAGCATAAACAAGATGGATTTGAAAATAAGGAAAGAATGGAGAGCTTGGTTTCACAAGAAACAAGTGGCAGGGTGGATGGAAGTGTATGAGGGTGGCCTCACATTTGCCACCATTAGAGGTGCTGGCCACCAAGTTCCTGTCCTTGCACCAGAACAATCCCTTTCTCTGTTCACCCATTTTCTCTCTTCTCACACTCTGCCATCTTCTCGCTTCTAA | 1410 | 0.4298 | MSIFWNLLFYCLLTTVSTGREYSGKETPQQEADRVKNLPGQPPVKFRHYAGYVKLRPHEEKALFYWFFEAQEAPSQKPLLLWLNGGPGCSSIGYGAARELGPFLVKDKERLKLNKFSWNRAANIIFLESPVGVGFSYTNNSKDLQELGDRVTAIDNYAFLIGWFKRFPSFRSHDFYIAGESYAGHYVPQLAEVIYEGNKDTKKGSYINLKGFMVGNAVMNDVTDVKGIIDYAWSHAIISDQEYYGIVKDCDFSKENKSKACEMRVGGLLEAYSEIDIYSIYSPICISDYQRAVSAKLLVAPHLLTSHDLWHTLPAGYDPCTEDYIDKYFNNEDVQKALHANITNLSYPYTLCSAVIRKWNDSPNTVLPVIKKLLHAGLRIWIYSGDTDGRVPVTSTRYSINKMDLKIRKEWRAWFHKKQVAGWMEVYEGGLTFATIRGAGHQVPVLAPEQSLSLFTHFLSSHTLPSSRF | 469 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi2296g00019 | 469 | Gene3D | alpha/beta hydrolase | 29 | 287 | IPR029058 | - | |
Gabi2296g00019 | 469 | FunFam | Carboxypeptidase | 29 | 287 | - | - | |
Gabi2296g00019 | 469 | ProSitePatterns | Serine carboxypeptidases, serine active site. | 177 | 184 | IPR018202 | GO:0004185 | |
Gabi2296g00019 | 469 | ProSitePatterns | Serine carboxypeptidases, histidine active site. | 431 | 448 | IPR033124 | GO:0004185 | |
Gabi2296g00019 | 469 | PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 34 | 446 | IPR001563 | GO:0004185|GO:0006508 | |
Gabi2296g00019 | 469 | FunFam | Carboxypeptidase | 366 | 461 | - | - | |
Gabi2296g00019 | 469 | Pfam | Serine carboxypeptidase | 39 | 460 | IPR001563 | GO:0004185|GO:0006508 | |
Gabi2296g00019 | 469 | Gene3D | - | 320 | 357 | - | - | |
Gabi2296g00019 | 469 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 114 | 126 | IPR001563 | GO:0004185|GO:0006508 | |
Gabi2296g00019 | 469 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 127 | 137 | IPR001563 | GO:0004185|GO:0006508 | |
Gabi2296g00019 | 469 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 431 | 444 | IPR001563 | GO:0004185|GO:0006508 | |
Gabi2296g00019 | 469 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 163 | 188 | IPR001563 | GO:0004185|GO:0006508 | |
Gabi2296g00019 | 469 | FunFam | Carboxypeptidase | 316 | 464 | - | - | |
Gabi2296g00019 | 469 | SUPERFAMILY | alpha/beta-Hydrolases | 30 | 465 | IPR029058 | - | |
Gabi2296g00019 | 469 | Gene3D | - | 366 | 460 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi2296g00019 | Gabi-Chr2296 | 151394 | 157547 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi2296g00019 | 325 | 464 | Calmodulin-binding Proteins | AT2G22960 | 31.206 | 6.04e-13 | 65.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi2296g00019 | K16297 | - | gmx:100799746 | 816.994 |