Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2296g00018 ATGACCAAACCAAGCAATCTCAATCTCAACCTCACCTCCGACCAACCTGCCACCGGAAACTTCTTTTCACTTAGCCTCTTCCTACTCAAAGACATACAAATTTTTGAGGTTTTCATTGCAGTTATTGTCTTCATAATCATTCATTCTCTTAGGCAAAAGAAGCATCATGGCTTGCCAGTTTGGCCTGTCCTTGGAATGTTACCTTCTTTGGTCACAGGACTCAGAACCAACATGTATGAATGGATCTCTGATGTGCTCAAAAGGCAAAATGGAACCTTTAGATTCAAAGGGCCTTGGTTTAGCAGCCTCAACTGCATTGTCACCTCTGATCCTCGCAACCTTGAGCATCTTCTCAAAACCAAGTTCCCTCACTTCCCTAAAGGAAGTTACTTCAGGAACACAGTTAGAGACCTACTTGGTGATGGTATATTCAATGCAGATGATGAGACATGGCAAAAGCAAAGGAAGACAGCAAGCATTGAGTTTCATTCAACAAAGTTCAGGCAATTAACAACACAATCCTTATTTGAGCTTGTCCACTCTAGGCTCTTACTTGTCTTAGAGGAATCGGTTGAGAAATCTGTTGCCATAGACCTTCAAGACATTCTCTTAAGGCTAACTTTTGATAATGTATGCATGATAGCATTTGGTGTTGATCCAGGTTGTTTGCGCTTGGGATTGCCTGATATACCATTTGCAAAAGCCTTTGAGGATGCAACAGAAGCCACATTGCTTCGTTTTGTTACCCCAACATGTATATGGAAGGCCATGAGGTTACTCAACTTGGGGATGGAAAGAAAGTTAAAGGAATCAATAAAAGGAGTTGATGAGTTTGCTGAGAATGTTATTCGGACAAGAAAGAAGGAACTCTCTTTGGAATGTGAGGATAAGGAGCAAATGTCAGATTTGTTAACAGTGTTTATGAGGCTGAAGGATGAGAGTGCAAAACCATATTCAGATAAGTTCTTGAGGGATATATGTGTGAACTTCATATTAGCAGGGAGGGACACTTCTTCAGTAGCTTTGAGCTGGTTTTTCTGGTTGCTTGATCAGAATCCTGCAGTGGAGGACAAGATAGTAGCAGAGATATGCAGGGTAGTGAGGCAGAGGAAAGACATAAAGAAGGAAGAATTTGATAATTCTTTGACATTTAAGCCCGAGGAGATTAAAAAGATGGATTATTTGCATGCTGCTTTGTCTGAAGCTCTCAGATTATACCCTTCTGTGCCTGTGGATCACAAGGAGGTAGTTGAAGATGAGACTTTCCCAGATGGAACAGTGCTAAAGAAGGGTACAAAAGTGATCTATGCAATTTATGCAATGGGAAGAATGGAAAGCATATGGGGGAAAGACTGCAAGGAGTTTAGGCCAGAAAGATGGTTAAGAGATGATCGTTTCATGAGTGAGTCTGCATACAAATTCACTGCATTCAATGGTGGACCTCGCTTGTGCTTAGGCAAAGAATTTGCATACTATCAGATGAAATATGCTGCGGCCAGCATCATATACCGTTACCATGTTAAGGTGGTGGAGAATCACCATGTAGTGCCAAAGCTTGCTTTAACTATGTACATGAAGCATGGAATCAAAGTTAACCTCTACAAAAGGGATGCAGCAGAAATTCAAAAATACTTGGAAGATTGGTTAAAATGA 1653 0.4096 MTKPSNLNLNLTSDQPATGNFFSLSLFLLKDIQIFEVFIAVIVFIIIHSLRQKKHHGLPVWPVLGMLPSLVTGLRTNMYEWISDVLKRQNGTFRFKGPWFSSLNCIVTSDPRNLEHLLKTKFPHFPKGSYFRNTVRDLLGDGIFNADDETWQKQRKTASIEFHSTKFRQLTTQSLFELVHSRLLLVLEESVEKSVAIDLQDILLRLTFDNVCMIAFGVDPGCLRLGLPDIPFAKAFEDATEATLLRFVTPTCIWKAMRLLNLGMERKLKESIKGVDEFAENVIRTRKKELSLECEDKEQMSDLLTVFMRLKDESAKPYSDKFLRDICVNFILAGRDTSSVALSWFFWLLDQNPAVEDKIVAEICRVVRQRKDIKKEEFDNSLTFKPEEIKKMDYLHAALSEALRLYPSVPVDHKEVVEDETFPDGTVLKKGTKVIYAIYAMGRMESIWGKDCKEFRPERWLRDDRFMSESAYKFTAFNGGPRLCLGKEFAYYQMKYAAASIIYRYHVKVVENHHVVPKLALTMYMKHGIKVNLYKRDAAEIQKYLEDWLK 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2296g00018 550 Gene3D Cytochrome P450 52 547 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2296g00018 550 PRINTS P450 superfamily signature 333 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2296g00018 550 PRINTS P450 superfamily signature 475 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2296g00018 550 PRINTS P450 superfamily signature 397 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2296g00018 550 PRINTS P450 superfamily signature 484 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2296g00018 550 FunFam Cytochrome P450 49 539 - -
Gabi2296g00018 550 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 477 486 IPR017972 GO:0005506|GO:0016705
Gabi2296g00018 550 PANTHER CYTOCHROME P450 47 530 - -
Gabi2296g00018 550 CDD CYP86A 93 528 - -
Gabi2296g00018 550 SUPERFAMILY Cytochrome P450 57 536 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2296g00018 550 PRINTS E-class P450 group I signature 322 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2296g00018 550 PRINTS E-class P450 group I signature 484 507 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2296g00018 550 PRINTS E-class P450 group I signature 396 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2296g00018 550 PRINTS E-class P450 group I signature 474 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2296g00018 550 PRINTS E-class P450 group I signature 342 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2296g00018 550 Pfam Cytochrome P450 57 522 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2296g00018 Gabi-Chr2296 142698 145629 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2296g00018 23 544 Cytochrome P450 AT5G23190 75.526 0.0 823
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2296g00018 K15402 - gmx:100809503 925.235