Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2295g00004 ATGGGAAGCTTCATCTTTAACCTTCACCTTATCGTTTCATCATTTCTTCTTGTCACTTTCTTGCTCGAAGCTGTCCATGGCAGCAAAAAGTGTTACATTGTATACTTGGGAGCGCATTCTCATGGTCCTAGCCCTATGTCTGTTGACATTGAGCTTGCTACCTATTCTCATTATGATTTGCTAGGTTCGATCTTGGGAAGCCGGGAGAAAGCAAAAGAAGCGATTATTTACTCATATAACAGACACATCAATGGCTTTGCTGCGATGCTTGAAGAGGAAGAAGCTGAAGATATTGCAAAAAACCCAAATGTAGTGTCTGTGTTCTTGAGCAAAGAGTATAAACTGCATACTACCCGGTCATGGGAATTTCTTGGATTGCACCGAAATAGTAAGAACTCTGCATGGCAAAAGGGAAGATTTGGTGAAAATACAATAATCGGTAACATTGACACAGGTGTTTGGCCCGAATCCAAGAGCTTCAGTGACAAAGGATTCGGTCCCGTCCCATCAAAATGGCGCGGGGGTAACGTCTGTCAAATCCCTGGCTCCAAGAAAAATCCTTGCAACAGGAAACTAATTGGAGCAAGATTCTTCAACAATGCTTATGAGGCATATTATGGCAAACTTCCCACATCAAAACATACAGCACGTGACTTTGTAGGACATGGTACACATACTCTATCAATCGCAGGTGGCAATTTTGTTCCTGGTGCAAGTGTCTTTGCTGTTGGAAATGGTACTGCAAAGGGTGGATCCCCAAGAGCAAGAGTTGCAGCCTACAAAGTGTGCTGGTCTCCAACTGATCCAGCAAGCTGCTTTGGTGCGGATGTGTTAGCTGCTATTGACCAAGCCATAAGTGATGGTGTTGATATCATCTCACTCTCTGCTGGTGGCCAATATCTTATCACTCCTGAAGGAGTATTCACAGATGAGGTTTCCATAGGGGCATTCCATGCTCTTGCTAGAAATATACTATTAGTTGCCTCTGCAGGGAATGATGGGCCAACACCTGGATCTGTTGTCAATGTGGCTCCATGGGTCTTCACTGTTGCTGCTAGCACAATAGATAGGGACTTTAGCAGTACTTTAACTTTTGGTAACAACCAACAAATCACGGGTGCTAGTCTTTTTGTAAACATACCACCTAACCAGGCCTTTTCTCTTATCCTCTCTACTGATGCTAAGCTTGCCAATGCTTCAAATAGAGATGCTCAACTTTGTAGGCCTGGAACACTTGATCGTACAAAAGTAAGCGGCAAAATAGTGTCATGCCTTCGAGAAGGAAAAATAAAATCAGTTTCTGAGGGTCAGGAAGCTATGTGTGCGGGAGCACAGGGAATGATTTTAGGAAATCAAAAGCAAAATGGAAATACACTTCAAGCTGAACCTCATGTTCTGTCTACGGTCAACTATCCACCACCTCAACCAAAAAAGCATAATCGTGACATAACTGCCACGGACTCTACAATAAACTCAAAAACTACAATAAAGATGTCCTCTGCAAAAACTTACCTTGGTAGAAAGCCAGCTCCAGTTATGGCTTCATACTCATCTAGAGGACCCAATAAGATTCAGCCATCAATCCTCAAGCCTGATGTAACTGCGCCTGGTGTTAACATACTTGCTGCCTATTCACTAGCCGCAAGTGCATCTAACCTATTATCAGACACTCGCCGGGGATTTCCATTTAATGTACTCCAAGGAACTTCTATGTCTTGTCCTCATGTTGCTGGCATTGCTGGACTTCTCAAAACACTTCATCCTAATTGGAGTCCTGCAGCTATTAAATCAGCAATCATGACCTCAGCAACATCACTAGATAACACCAACATGCCAATTAGGGATGCATTTGGGAAAAAATCAGCAGATCCATTTGCTTATGGTTCAGGACATGTTCAACCTGACCTTGCTATAGATCCTGGACTTGTTTATGATCTAGGCCTTACTGATTACTTGAACTTCTTATGTGCTTCTGGTTATGACCAACAACTCATTTCCGCACTTAATTTCAATAGGACAATTATTTGTTCAGGATCTCACAGCGTAACAGACTTGAACTACCCTTCAATCACATTGCCAAATCTTGGGTTAAATGCAGTAAACGTTACTCGTACAGTGACCAATGTTGGGACACCAAGCACTTATATTGCAAATGCAAGAATGGCCGGATATAACATTGTTGTTGTACCGAATACCTTGAGTTTCAAGAAAATTGGTGAAAAGAAGACATTCCAGGTAATTGTGCAAGCAAGGAGTATGACTAATAGGGGAACTTATCAATTTGGGGAATTGAGATGGACAAATGGAAAGCACATAGTCAGAAGTCCTATTACAGTTCGGCGGAAATGA 2349 0.4236 MGSFIFNLHLIVSSFLLVTFLLEAVHGSKKCYIVYLGAHSHGPSPMSVDIELATYSHYDLLGSILGSREKAKEAIIYSYNRHINGFAAMLEEEEAEDIAKNPNVVSVFLSKEYKLHTTRSWEFLGLHRNSKNSAWQKGRFGENTIIGNIDTGVWPESKSFSDKGFGPVPSKWRGGNVCQIPGSKKNPCNRKLIGARFFNNAYEAYYGKLPTSKHTARDFVGHGTHTLSIAGGNFVPGASVFAVGNGTAKGGSPRARVAAYKVCWSPTDPASCFGADVLAAIDQAISDGVDIISLSAGGQYLITPEGVFTDEVSIGAFHALARNILLVASAGNDGPTPGSVVNVAPWVFTVAASTIDRDFSSTLTFGNNQQITGASLFVNIPPNQAFSLILSTDAKLANASNRDAQLCRPGTLDRTKVSGKIVSCLREGKIKSVSEGQEAMCAGAQGMILGNQKQNGNTLQAEPHVLSTVNYPPPQPKKHNRDITATDSTINSKTTIKMSSAKTYLGRKPAPVMASYSSRGPNKIQPSILKPDVTAPGVNILAAYSLAASASNLLSDTRRGFPFNVLQGTSMSCPHVAGIAGLLKTLHPNWSPAAIKSAIMTSATSLDNTNMPIRDAFGKKSADPFAYGSGHVQPDLAIDPGLVYDLGLTDYLNFLCASGYDQQLISALNFNRTIICSGSHSVTDLNYPSITLPNLGLNAVNVTRTVTNVGTPSTYIANARMAGYNIVVVPNTLSFKKIGEKKTFQVIVQARSMTNRGTYQFGELRWTNGKHIVRSPITVRRK 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2295g00004 782 Gene3D - 655 781 - -
Gabi2295g00004 782 FunFam Subtilisin-like protease SBT5.3 21 116 - -
Gabi2295g00004 782 Pfam Peptidase inhibitor I9 32 116 IPR010259 -
Gabi2295g00004 782 ProSiteProfiles Serine proteases, subtilase domain profile. 120 638 - -
Gabi2295g00004 782 SUPERFAMILY Subtilisin-like 115 642 IPR036852 GO:0004252|GO:0006508
Gabi2295g00004 782 Gene3D - 356 505 - -
Gabi2295g00004 782 Pfam Fibronectin type-III domain 684 779 IPR041469 -
Gabi2295g00004 782 CDD PA_subtilisin_like 362 496 - -
Gabi2295g00004 782 ProSitePatterns Serine proteases, subtilase family, serine active site. 568 578 IPR023828 -
Gabi2295g00004 782 Gene3D Peptidase S8/S53 domain 144 651 IPR036852 GO:0004252|GO:0006508
Gabi2295g00004 782 PRINTS Subtilisin serine protease family (S8) signature 218 231 IPR015500 -
Gabi2295g00004 782 PRINTS Subtilisin serine protease family (S8) signature 567 583 IPR015500 -
Gabi2295g00004 782 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
Gabi2295g00004 782 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 116 IPR037045 -
Gabi2295g00004 782 FunFam Subtilisin-like protease SBT1.5 143 367 - -
Gabi2295g00004 782 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 779 IPR045051 -
Gabi2295g00004 782 Pfam Subtilase family 141 609 IPR000209 GO:0006508|GO:0008236
Gabi2295g00004 782 CDD Peptidases_S8_3 113 604 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2295g00004 Gabi-Chr2295 68031 74358 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2295g00004 32 780 Subtilisin-like Serine Gene Family AT2G04160 52.708 0.0 757
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2295g00004 - - gmx:100803751 1254.58