Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2295g00002 ATGGGAAGCTTCATTTTTAACCTTCACCTTATCGTTTCATCATTTTTCCTTTTCATTTTCTTGCTCGAAGCTGTTCATGGAAGCAAAAAGTGTTACATTGTATACATGGGAGCGCATTCTCATGGTCCCAGTCCTATGTCTGCTGACCTTGAACTCGCTACCTATTCTCATTATGATTTACTAGGTTCGATCTTGGGAAGCCCCGAGAAAGCGAAAGAAGCAATTATTTACTCATATAACAGACACATTAATGGCTTTGCTGCGATGCTTGAAGAGGAAGAAGCTGAAGATATTGCAAAAAACCCAAATGTAGTGTCTGTGTTCTTGAGCAAAAAGTATAAACTGCATACTACCCGGTCATGGGAATTTCTTGGATTGCACAGAAATAGTAAGAACTCTGCATGGCAAAAGGGAAGATTTGGTGAAAATACAATAATCGGTCATATTGACACAGGTGTTTGGCCTGAATCCAAGAGCTTCAGTGACAAAGGATACGGCCCCGTCCCATCAAAATGGCGCGGGGGTAACGTCTGTCAAATTGACAAACAAAATGGCTCCAAGAAAAATCCTTGCAACAGGAAGCTAATTGGAGCAAGATTCTTCAACAAAGCTTATGAGGCAGTTAATGGCAAACTTATCGCAGCACTACATACAGCACGTGACTTAGTAGGACATGGTACACATACTCTATCAACCGCAGGTGGCAATTTTGTGCCTGGTGCAAGTGTCTTTGCTGTTGGAAATGGTACTGCAAAGGGTGGATCCCCAAGGGCAAGAGTTGCAACCTACAAAGTGTGCTGGTCTCTAACTGATGCTGCAGACTGCTATGGTGCGGATGTGTTATCTGCTATTGACCAAGCCATCAGTGATGGTGTTGATATCATCACACTCTCTGCTGGTGGCCAATATGTTGTGTCACCTGAAGATATATTCACAGATGAGGTTTCCATAGGGGCATTTCACGCACTTGCTAGAAATATACTATTAGTTGCCTCTGCAGGGAATGATGGACCAACACCTGGATCTGTTGTCAATGTGGCTCCATGGGTATTCACTGTTGCTGCTAGCACAATTGATAGGGAATTTAGCAGTACTTTAACTTTTGGTAACAACCAACAAATCACGGGTGCCAGTCTTTTTGTAAACATACCACCTAACCAGGCCTTTTCTCTTATCCTTGCCACTGATGCTAAGCTTGCCAATGCTTCAAATCGAGATGCTCAACTTTGTAGGGCTGGAACACTTGATCGTACAAAAGTAAGCGGCAAAATAGTGGCATGCCTTCGAGAAGGAAAAATAAAATCTGTTTCTGAGGGTCAGGAAGCTATGTCTGCGGGCGCACAGGGAATGATTTTGGGAAATCAAGAGCAAAATGGAAATACAAAACTCGCTGAACCTCATGTTCTGTCTACGGTCAACTATTATAAAAAATCTAAACCAAAAGAGCATAATCTTGGCAAACCTGGTCCACCACCGAAACATCAAACAGAGCTTACTCTTGACATAACTGCCACGGACTCTACAATAAACTCAAAAACTACAGTACGGATGTCCACTGCAAAAACTTACCTTGGTAGAAAGCCAGCTCCAGTTATGGCTTCATATTCATCTAGAGGACCCAATAAGATTCAGCCATCAATACTCAAACCTGATGTAACTGCACCTGGTGTGAACATACTTGCTGCCTATTCACTATACGCAAGTGCATCCAACTTACCATCAGACCCTCGCCAAGGATTTCCATTCAATGTACTCCAAGGAACTTCTATGTCTTGCCCTCACGTTGCTGGCATTGCTGGACTTCTCAAAACACTTCATCCTAATTGGAGTCCTGCAGCTATTAAATCAGCAATCATGACCACAGCAACAACAAAAGATAACACCAACAAGCCAATTAGGGATGCATTTGAGAAAACATTAGCAACTCCATTTGCTTATGGTTCAGGACATGTTCAACCCGACCTTGCTGTAGATCCTGGACTTGTTTATGATCTAGGCCTCACTGATTACTTGAACTTCTTATGTGCTTCTGGTTATGACCAACAACTCATTTCCTCACTTAATTTCAAAAGGACATTTATTTGTTCAGAAACTCACAGCGTAACAGACTTGAACTACCCTTCAATCACATTGCCAAATCTTGGGTTAAAAGCCGTAAACGTTATTCGTACAGTGACCAATGTTGGGACACCAAGCACTTATTTTGCAAATATTACTCGTACAGTGGCCGGATATAACATTGGTGTTGTACCGAATACCTTGAGTTTCAAGAAAATTGGTGAAAAGAAGACATTCCAGGTGATTGTGCAAGCAAGGAGTGTGACTAAGAGGGGAACTTATAAACATGGGGAATTGACATGGACAAATGGAAAGCACATAGTCAGAAGTCCTATTACAGTTAAGCGCAAATGA 2412 0.4212 MGSFIFNLHLIVSSFFLFIFLLEAVHGSKKCYIVYMGAHSHGPSPMSADLELATYSHYDLLGSILGSPEKAKEAIIYSYNRHINGFAAMLEEEEAEDIAKNPNVVSVFLSKKYKLHTTRSWEFLGLHRNSKNSAWQKGRFGENTIIGHIDTGVWPESKSFSDKGYGPVPSKWRGGNVCQIDKQNGSKKNPCNRKLIGARFFNKAYEAVNGKLIAALHTARDLVGHGTHTLSTAGGNFVPGASVFAVGNGTAKGGSPRARVATYKVCWSLTDAADCYGADVLSAIDQAISDGVDIITLSAGGQYVVSPEDIFTDEVSIGAFHALARNILLVASAGNDGPTPGSVVNVAPWVFTVAASTIDREFSSTLTFGNNQQITGASLFVNIPPNQAFSLILATDAKLANASNRDAQLCRAGTLDRTKVSGKIVACLREGKIKSVSEGQEAMSAGAQGMILGNQEQNGNTKLAEPHVLSTVNYYKKSKPKEHNLGKPGPPPKHQTELTLDITATDSTINSKTTVRMSTAKTYLGRKPAPVMASYSSRGPNKIQPSILKPDVTAPGVNILAAYSLYASASNLPSDPRQGFPFNVLQGTSMSCPHVAGIAGLLKTLHPNWSPAAIKSAIMTTATTKDNTNKPIRDAFEKTLATPFAYGSGHVQPDLAVDPGLVYDLGLTDYLNFLCASGYDQQLISSLNFKRTFICSETHSVTDLNYPSITLPNLGLKAVNVIRTVTNVGTPSTYFANITRTVAGYNIGVVPNTLSFKKIGEKKTFQVIVQARSVTKRGTYKHGELTWTNGKHIVRSPITVKRK 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2295g00002 803 FunFam Subtilisin-like protease SBT1.5 143 370 - -
Gabi2295g00002 803 Gene3D - 359 524 - -
Gabi2295g00002 803 Gene3D Peptidase S8/S53 domain 144 670 IPR036852 GO:0004252|GO:0006508
Gabi2295g00002 803 FunFam Subtilisin-like protease SBT5.3 21 116 - -
Gabi2295g00002 803 SUPERFAMILY Subtilisin-like 115 661 IPR036852 GO:0004252|GO:0006508
Gabi2295g00002 803 Pfam Peptidase inhibitor I9 32 116 IPR010259 -
Gabi2295g00002 803 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 116 IPR037045 -
Gabi2295g00002 803 Gene3D - 674 802 - -
Gabi2295g00002 803 Pfam Subtilase family 141 627 IPR000209 GO:0006508|GO:0008236
Gabi2295g00002 803 CDD Peptidases_S8_3 113 623 IPR034197 -
Gabi2295g00002 803 CDD PA_subtilisin_like 365 472 - -
Gabi2295g00002 803 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 800 IPR045051 -
Gabi2295g00002 803 ProSitePatterns Serine proteases, subtilase family, serine active site. 587 597 IPR023828 -
Gabi2295g00002 803 ProSiteProfiles Serine proteases, subtilase domain profile. 120 657 - -
Gabi2295g00002 803 Pfam Fibronectin type-III domain 703 800 IPR041469 -
Gabi2295g00002 803 PRINTS Subtilisin serine protease family (S8) signature 586 602 IPR015500 -
Gabi2295g00002 803 PRINTS Subtilisin serine protease family (S8) signature 221 234 IPR015500 -
Gabi2295g00002 803 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2295g00002 Gabi-Chr2295 19002 24111 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2295g00002 16 801 Subtilisin-like Serine Gene Family AT2G04160 50.809 0.0 745
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2295g00002 - - gmx:100803751 1248.8