Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2293g00027 ATGGAGAATTCACAATCAGATTCAAGTTCAACACCAAAGTCTCTGATGGAGAACCTGCTAGGCCTTCTAAGGGTTCGTGTCAAGCGTGGTGTCAACCTCGCCGTTCGTGATGTTCGCAGCAGCGATCCTTATGTTGTTATTAAGATGTCCAACCAGAAACTTAAGACTCGTGTGATTAAGAAGGATGTTAATCCTGAGTGGAATGAAGACCTCACGCTTTCTATTACAAATCCGAATCTACCTGTCTCACTGACTGTTTATGACCATGACACTTTTAGCAAAGATGACAAAATGGGAGATGCTGAGTTCGAAATCTTGCCCTTTATAGAGGCCTTGAGGATGAACTTAACTGGCCTCCCAACTGGTACTGTAGTCACAAGAATACAACCAAGTGATCATAACTGTCTTGTAGATGAGAGCTGTATAACTTATAGCAACGGCAAGGTTATTCAAGATATGATCCTTAGGTTGCGAAATGTGGAATGTGGTGAAGTTGAAATCCAACTGCATTGGATTGATCTTCCCGGTTCTAAGGGTTTGTGA 543 0.4236 MENSQSDSSSTPKSLMENLLGLLRVRVKRGVNLAVRDVRSSDPYVVIKMSNQKLKTRVIKKDVNPEWNEDLTLSITNPNLPVSLTVYDHDTFSKDDKMGDAEFEILPFIEALRMNLTGLPTGTVVTRIQPSDHNCLVDESCITYSNGKVIQDMILRLRNVECGEVEIQLHWIDLPGSKGL 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2293g00027 180 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 18 178 IPR044562 -
Gabi2293g00027 180 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 17 106 IPR035892 -
Gabi2293g00027 180 SMART C2_3c 22 117 IPR000008 -
Gabi2293g00027 180 Pfam C2 domain 21 105 IPR000008 -
Gabi2293g00027 180 Gene3D C2 domain 17 178 IPR035892 -
Gabi2293g00027 180 CDD C2_ArfGAP 20 163 - -
Gabi2293g00027 180 ProSiteProfiles C2 domain profile. 4 121 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2293g00027 Gabi-Chr2293 268920 271091 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2293g00027 53 180 C2H2 Transcription Factor Family AT1G70790 60.769 1.39e-52 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2293g00027 - - gmx:100810504 311.227