Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2293g00026 ATGGAGAATTCACAATCAGATTCAAGTTCAACACCAAAGTCTCTGATGGAGAACCTGCTAGGCCTTCTAAGGGTTCGTGTCAAGCGTGGTGTCAACCTCGCCGTTCGTGATGTTCGCAGCAGCGATCCTTATGTTGTTATTAAGATGTCCAACCAGGTTTCTCTCTCTCTCTTAAATTTTAAACTTAAGACTCGTGTGATTAAGAAGGATGTTAATCCTGAGTGGAATGAAGACCTCACGCTTTCTATTACAAATCCGAATCTACCTGTCTCACTGACTGTTTATGACCATGACACTTTTAGCAAAGATGACAAAATGGGAGATGCTGAGTTCGAAATCTTGCCCTTTATAGAGGCCTTGAGGATGAACTTAACTGGCCTCCCAACTGGTACTGTAGTCACAAGAATACAACCAAGTGATCATAACTGTCTTGTAGATGAGAGCTGTATAACTTATAGCAACGGCAAGGTTATTCAAGATATGATCCTTAGGTTGCGAAATGTGGAATGTGGTGAAGTTGAAATCCAACTGCATTGGATTGATCTTCCCGGTTCTAAGGGTTTGTGA 567 0.418 MENSQSDSSSTPKSLMENLLGLLRVRVKRGVNLAVRDVRSSDPYVVIKMSNQVSLSLLNFKLKTRVIKKDVNPEWNEDLTLSITNPNLPVSLTVYDHDTFSKDDKMGDAEFEILPFIEALRMNLTGLPTGTVVTRIQPSDHNCLVDESCITYSNGKVIQDMILRLRNVECGEVEIQLHWIDLPGSKGL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2293g00026 188 ProSiteProfiles C2 domain profile. 4 129 IPR000008 -
Gabi2293g00026 188 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 17 123 IPR035892 -
Gabi2293g00026 188 CDD C2_ArfGAP 20 171 - -
Gabi2293g00026 188 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 18 186 IPR044562 -
Gabi2293g00026 188 SMART C2_3c 22 125 IPR000008 -
Gabi2293g00026 188 Gene3D C2 domain 17 186 IPR035892 -
Gabi2293g00026 188 Pfam C2 domain 21 113 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2293g00026 Gabi-Chr2293 268911 271118 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2293g00026 60 188 C2H2 Transcription Factor Family AT1G70790 60.305 1.44e-52 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2293g00026 - - gmx:100810504 303.908