Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2293g00004 ATGGTCTTCAAAGGAAGGTTCTTCTCCTCTTCCAAGAAATCCGATTCTTCTAGCCCTGATGCTTCTTCCAATAGTCCTCGATCATTCACCTCCAATTCCCCTTCCAGATCCGACAAGAAAAAGCCCAAATCCGCTGCCAATCCATCCCTAGCCGCCGCCACCGGTGGCGGCGGAGGATTCGGCGCCGCCGCCGCCGCGTGCCGCCAGACGCAGGTGAAGGACGGAACCAGGAAGAAGGATGCTGTCGTCAAGGGCAAAGAGACCCAAACTCCACCGCCGGAGTCTCGTTACGGCAACAAGGACTCACCGTCGAAGAAGTTGACGGCGGCGGCGGCGGCTGAGGGAAAGGAATCGCCGTCGTCGTCGTCGTCTTCGGTTTCGCCGATTCTGGCATCGTCGCTTGGGCTGAACAGGATAAAGACGAGATCGGGGCCGTTGCCGCAGGAGAGCTTCTTCGGGTTTAGGGGAGATAAGGCGACGGCGATGACGGCGGCGCTCGGTGGCAGTAACCTCTCCAAAGGTGGTAGCCGTGGTGGTGATGGGAAGAAGAAGGAGCTGGTGAACCAGAACAGAGTAGGGTTTCACGAGGGTTTAGGCGCTGGGACCGGAGCTTGGGTTGATAATGGGAGCAATTCGGATAGCATGTCGACGGGGAGTGGGCCGTCCAGGGAACAGAGTCCGATTGTGTTGGCTAAGTCGCGGCTACAGAACGGAGAATCATCCTCCGAAGCAGGGAAGCAGGCATCATCATGGGCTCAGAATGGAGGCTTAAGAAGTGCAGATGTTTGCACTCCAGAGACAGCATATGATTTTGAAAACCCAAAGGAGTCTGAATCTCCTCGTTTTCAAGCTATATTACGTGTCACGAGTGCACCCAGAAAGAGGTTTCCAGCAGACATCAAGAGTTTTTCCCATGAGTTGAATTCCCGGCCTTTTCCATTTTTTAAGCGTCGAGGGTTAAATAACCTTGAGGATATCTTGGTTGTTATTAGGGCAAAATTTCATAAAGAAAAGGAAGAGGTGAACTCTGATCTGGCTATTTTTGCTGCAGACCTGGTTGGAATTCTTGAAAAAAATGCAGATACTCATCCTGAATGGCAAGAGAAAATTGAAGACTTGCTAGTTTTGGCTAAGAGTTGTGCTATGACTTCACCTGGGGAGTTTTGGCTTCAGTGTGAAGGCATAGTTCAGGAGTTGGATGATAAGCGTCAAGAGCTTCCTCCGGGAACGCTAAAGCAGCTTCACACTCGAATGCTTTTCATTCTCACAAGGTGTACCAGATTGTTGCAATTCCACAAGGAAAGTGGTTTGGCAGATGAACATGTTTTCAATATCCGTGAATCCATGCATTCTGTGGAAAAATGTATTCCTCCTGGTGTGGGAAGGGATACTAAAAGTTCTAGTGCCGCAAAGGCCTCAAAGGCTTCGATGAAAAAAGCTTTTAGTCAGGAGCAGAGTACCTTGGGTTGGAAGAAAGATGTTATGCAACCAGAAAATGTATTGCTTCCTGTTGATGATGATACTTCAAAACACTTTGAGTCTCCTTCAGGCAGGGATCGGATGGCTTCCTGGAAGAAATTCCCATCTCGATCAGGAAAAAGCCCAAAAGAAACATCTCAGTTGAAGGACCAAAATTATGGGAGGGTTGAACCTTCAAAGACATCAAATAATAAGAGATTCACTTCTGATGTGGATCTTTCTGCTGCTAAACCGTCGGAGCTTCTTCCTAACAAAGATTCACATGACCATGCTTCAAAGCACCAACACAAAGTTTCTTGGGGCTACTGGGATAATCAGCAGAATAATAGTGAGGAGAGTTCGATAATTTGTCGTATATGTGAAGAGGAAGTACCTACTTCACATGTTGAAGAGCATTCAAGAATTTGTGCAATTGCTGATAGATGTGACCAGAAGGGTCTGAGGGTAAATGATCGTCTTTTCAGAATTGCTGACACACTTGAAAAGATATGTACGCAGAAGGATACCCAACAAATAGTGGGAAGTCCTGATGTTGCAAAAGTGTCAAATTCGAGTATGACCGAAGAATCTGATGTTCTTTCCCCTAAACTTAGTGATTGGTCTCGCAGAGGCTCAGAGGATATGCTAGACTGTTTCCCTGAAACTGATAATTCCGTTGTTATGGATGACCTAAAGGGATTACCACTTATATCATGTAAAACTCGTTTTGGTCCAAAGTCTGACCAAGGTATGACAACATCATCTGCAGGGAGCATGACTCCTAGGTCTCCTTTAATGACACCAAGGACAAGTCAGATTGACTTGCTCTTGGCGGGGAAGGGTGCTTATTCCGAACATGATGATCTGCCACAGATGAATGAACTTGCTGATATAGCACGATGTGTGGCAAACGCACCTCTGGATGATGATCGCACAACATCGTATTTATTATCTTGTCTTGATGACTTGCGGATTGTTGTAGAACGAAGGAAATTTGATGCCCTTACTGTGGAGACCTTTGGAACCCGCATTGAGAAGCTGATCCGGGAGAAGTATCTGCAGCTTACTGAAATGGTGGATGTCGATAAGATAGAAATAGGGGGCACTTTAATTGATGATGATGTTCTCTTGGAAGATGATGTGGTTCGTAGCTTGAGAACAAGCCCAGTCCATTCTTCAAGGGATCGTACCTCTATTGATGACTTTGAGATTATAAAACCTATCAGTCGTGGGGCATTTGGACGGGTTTTCTTGGCAAAAAAGAGAACGACAGGTGATCTTTTTGCAATAAAGGTTCTCAAGAAGGCAGATATGATCCGGAAGAATGCTGTGGAAAGTATATTAGCAGAACGTGATATCTTAATTACAGTGCGCAATCCTTTTGTGGTTCGATTCTTCTATTCTTTTACATGTCGTGAGAACTTATATCTTGTCATGGAGTATCTGAATGGAGGTGACCTCTATTCATTATTAAGGAATTTAGGGTGCCTAGATGAGGAAGTTGCCCGTGTATATATTGCTGAAGTGGTTCTTGCATTAGAGTATTTGCATTCGCTGCGTGTGGTTCATCGTGACTTGAAGCCCGACAATTTATTGATTGCACATGATGGTCACATCAAGTTGACAGACTTTGGGCTTTCAAAAGTTGGTCTCATCAACAGCACTGATGATTTGTCTGGTCCAGCAGTGAGTGGGACATCCCTACTCGGGGAGGATGAACCTGACATAATTACATCTGAGGATCAAAGGGAACGGAGGAAGAAACGTTCGGCTGTGGGTACGCCTGATTACTTAGCACCAGAGATACTTTTGGGAACTGGACATGGGTATACCGCAGATTGGTGGTCTGTTGGAGTCATTTTATTTGAGTTGCTTGTTGGTATTCCACCCTTCAATGCAGAGCATCCTCAGACTATATTTGATAATATTCTTAATCGTAAGATACCTTGGCCCACAGTTCCTGAAGAAATGAGTCCTGAAGCACAGGATCTTATTGATCGATTATTGACTGAAGATCCTAATCAAAGACTGGGAGCCAGAGGGGCATCAGAGGTTAAGCAACATGTTTTCTTCAAGGATATAAACTGGGACACACTTGCCAGGCAGAAAGCTGCATTTGTTCCTGCTTCTGAGAGTGCTCTAGATACCAGTTACTTCACTAGTCGCTACTCATGGAATACTTCCGATGGCTTTGCATATCCAGCAAGTGATGTTGAGGATTATAGTGATGCTGATAGCTTAAGTGGCAGCAGTAGTTGCTTGAGCAATCGCCAAGATGAAGGAGATGAATGTGGGGGTCTTGCTGAGTTTGATTCTGGCTTATCTGTCAATTACTCTTTTAGTAATTTCTCCTTTAAGAATCTATCCCAACTTGCATCAATAAATTACGATCTCACCAAGGGATGGAAAGATGATCCACAACAAATTCCGGTGCATAGCTGTCTCATCCTTTGTCATATAGTCCAGAATTTGGTTTTCGACCTATGA 3945 0.4535 MVFKGRFFSSSKKSDSSSPDASSNSPRSFTSNSPSRSDKKKPKSAANPSLAAATGGGGGFGAAAAACRQTQVKDGTRKKDAVVKGKETQTPPPESRYGNKDSPSKKLTAAAAAEGKESPSSSSSSVSPILASSLGLNRIKTRSGPLPQESFFGFRGDKATAMTAALGGSNLSKGGSRGGDGKKKELVNQNRVGFHEGLGAGTGAWVDNGSNSDSMSTGSGPSREQSPIVLAKSRLQNGESSSEAGKQASSWAQNGGLRSADVCTPETAYDFENPKESESPRFQAILRVTSAPRKRFPADIKSFSHELNSRPFPFFKRRGLNNLEDILVVIRAKFHKEKEEVNSDLAIFAADLVGILEKNADTHPEWQEKIEDLLVLAKSCAMTSPGEFWLQCEGIVQELDDKRQELPPGTLKQLHTRMLFILTRCTRLLQFHKESGLADEHVFNIRESMHSVEKCIPPGVGRDTKSSSAAKASKASMKKAFSQEQSTLGWKKDVMQPENVLLPVDDDTSKHFESPSGRDRMASWKKFPSRSGKSPKETSQLKDQNYGRVEPSKTSNNKRFTSDVDLSAAKPSELLPNKDSHDHASKHQHKVSWGYWDNQQNNSEESSIICRICEEEVPTSHVEEHSRICAIADRCDQKGLRVNDRLFRIADTLEKICTQKDTQQIVGSPDVAKVSNSSMTEESDVLSPKLSDWSRRGSEDMLDCFPETDNSVVMDDLKGLPLISCKTRFGPKSDQGMTTSSAGSMTPRSPLMTPRTSQIDLLLAGKGAYSEHDDLPQMNELADIARCVANAPLDDDRTTSYLLSCLDDLRIVVERRKFDALTVETFGTRIEKLIREKYLQLTEMVDVDKIEIGGTLIDDDVLLEDDVVRSLRTSPVHSSRDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILITVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEEVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTSLLGEDEPDIITSEDQRERRKKRSAVGTPDYLAPEILLGTGHGYTADWWSVGVILFELLVGIPPFNAEHPQTIFDNILNRKIPWPTVPEEMSPEAQDLIDRLLTEDPNQRLGARGASEVKQHVFFKDINWDTLARQKAAFVPASESALDTSYFTSRYSWNTSDGFAYPASDVEDYSDADSLSGSSSCLSNRQDEGDECGGLAEFDSGLSVNYSFSNFSFKNLSQLASINYDLTKGWKDDPQQIPVHSCLILCHIVQNLVFDL 1314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2293g00004 1314 MobiDBLite consensus disorder prediction 670 692 - -
Gabi2293g00004 1314 MobiDBLite consensus disorder prediction 670 687 - -
Gabi2293g00004 1314 SUPERFAMILY Protein kinase-like (PK-like) 885 1215 IPR011009 -
Gabi2293g00004 1314 MobiDBLite consensus disorder prediction 732 751 - -
Gabi2293g00004 1314 MobiDBLite consensus disorder prediction 502 586 - -
Gabi2293g00004 1314 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1007 1019 IPR008271 GO:0004672|GO:0006468
Gabi2293g00004 1314 Gene3D Transferase(Phosphotransferase) domain 1 972 1195 - -
Gabi2293g00004 1314 MobiDBLite consensus disorder prediction 1 129 - -
Gabi2293g00004 1314 MobiDBLite consensus disorder prediction 9 33 - -
Gabi2293g00004 1314 CDD STKc_MAST_like 894 1182 - -
Gabi2293g00004 1314 PANTHER SERINE/THREONINE-PROTEIN KINASE 582 1270 - -
Gabi2293g00004 1314 Pfam Protein kinase domain 888 1177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2293g00004 1314 MobiDBLite consensus disorder prediction 533 563 - -
Gabi2293g00004 1314 MobiDBLite consensus disorder prediction 1062 1077 - -
Gabi2293g00004 1314 Gene3D Phosphorylase Kinase; domain 1 886 1206 - -
Gabi2293g00004 1314 FunFam probable serine/threonine protein kinase IREH1 886 975 - -
Gabi2293g00004 1314 MobiDBLite consensus disorder prediction 454 478 - -
Gabi2293g00004 1314 MobiDBLite consensus disorder prediction 165 258 - -
Gabi2293g00004 1314 ProSiteProfiles AGC-kinase C-terminal domain profile. 1178 1281 IPR000961 GO:0004674|GO:0005524|GO:0006468
Gabi2293g00004 1314 MobiDBLite consensus disorder prediction 115 129 - -
Gabi2293g00004 1314 ProSiteProfiles Protein kinase domain profile. 888 1177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2293g00004 1314 MobiDBLite consensus disorder prediction 1044 1077 - -
Gabi2293g00004 1314 SMART serkin_6 888 1177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2293g00004 1314 MobiDBLite consensus disorder prediction 504 532 - -
Gabi2293g00004 1314 MobiDBLite consensus disorder prediction 205 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2293g00004 Gabi-Chr2293 52999 65887 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2293g00004 61 1298 AGC Kinase Gene Family AT3G17850 67.036 0.0 1644
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Gabi2293g00004 Pkinase 7.8e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2293g00004 - - gmx:100776995 2071.59