Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2293g00001 ATGCGTTGCAGATTCCACTTCAACTTCGGCTGCATCTTTTGGACACCCTATGCTCTTTCGTTCATATCAATCATTTTTGTCATCTTCTTCTTCATAATCATTGCCCCCTCAAACCTCAATTTCTATGTAACTGAAGCCTCTCTCACACAGTTCAACCTCAACAACAACACCACCTTATATTACAACTTCAAACTCAACATCACAGTGAGAAACCCCAACAACAATGTCATAGTGTATTATAGGGTGATGAGAGCAAGTGTTTGGTACAAACATAACTACTTTGCTAATAATATTAGCTTGGCACCCTTTGACCAAGGCAAAAAGAAGACTAGCTTCCTTCAAACTACAATGTTTGATGGAAACAAAGTATTCAATCTCAAACCTAAACAACTTGGTGAGTACAATGAGGAGACACGTGTTGGGATATACAATGACTTGGATGTGGATTTGGATTTTGAAGTTATATTCAAGTATGTTGGAATGTTCAAGAGTAAAAGTTTCAATCCACCCACTGTGCAATGTCGTCAATTGAGTGTTCCTTTGATTTCAAATGGTAAATCAGCATCTCCTTTCAATGTCACCAAATGTAGCACCCCTTATTTCTTTACATATCGTAATTTATGA 624 0.3734 MRCRFHFNFGCIFWTPYALSFISIIFVIFFFIIIAPSNLNFYVTEASLTQFNLNNNTTLYYNFKLNITVRNPNNNVIVYYRVMRASVWYKHNYFANNISLAPFDQGKKKTSFLQTTMFDGNKVFNLKPKQLGEYNEETRVGIYNDLDVDLDFEVIFKYVGMFKSKSFNPPTVQCRQLSVPLISNGKSASPFNVTKCSTPYFFTYRNL 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2293g00001 207 Pfam Late embryogenesis abundant protein 66 167 IPR004864 -
Gabi2293g00001 207 PANTHER OS05G0367900 PROTEIN 12 180 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2293g00001 Gabi-Chr2293 17308 17931 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2293g00001 33 181 SNARE and Associated Proteins AT1G32270 26.667 3.84e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2293g00001 - - gmx:100784278 225.713