Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2284g00020 ATGGCCGTGGAACTCATGGTGTTCCCGAAACTCGACGAGCAAAAGGCCATACAAGAGGCTGCATCGGAAGGCCTCAATGGCATGGAGCACCTGATCCGAATCCTCTCCCATCAACCAACTCACTTAAACACAGACCTCACAGACGGCACCGTTTTAAAGTTCAAAAAACTCATCTCCTTGCTAAACCGAACCGGTCACGCCCGGTTCAGGCGAGCACCGGTTCACCGCTCCTCTTCTTCGCCTACCACTACCTCATCCTCCTCCCTCCCTCCGCTGCCGCAACTGCAAGCGTTGAACATATCTCCGCCGCCGCAGTTCACTTCTCCGGCGCCGGTGGCCGTCCACCCCGCTCCGGCGAGCTTCGTCCCTGCGCAGCCGCAGAGCTTGACGCTCGATTTCACGAAGCCTAATAATCACATCTTGAGCTCTAATGCCAAATCAATGGAGCTCGAGTTCTCGAAGGAGACGTTCAGCGTCTCCTCGAATTCATCTTTCATGTCCTCCGCCATCACCGGAGACGGCAGTGTCTCCAACGGCAAGCAGGGATCGTCGATCTTCCTGACGCAGTCGGCAGCGCCGGCAGCGTCCGGCGGAAAACCTCCGCTGTCATCGGCGCCGTTCAAGAAAAGGTGCCACGACCATCGAGCTCACTCCGACAACATCTCCGGCTCCAGCAAGTGCCACTGCATCAAGAGAAGGAAAAATCGGATGAAGAAGACTGTGAGAGTGCCGGCGATTAGTTCGAAGATCGCCGATATACCTGCCGACGAGTACTCGTGGCGAAAATACGGTCAGAAACCTATCAAGGGATCGCCGTACCCACGAGGCTATTATAAGTGCAGTACGGTGAGAGGGTGCCCAGCGAGGAAACACGTGGAGCGTGCACCGGATGATCCGGCGATGTTGATCGTGACGTACGAAGGGGAGCACAGGCACACGATTCATGCCGCGATGCAGGAGAACGCAGCCGGGGTTGTGGGTTTGGTATTCGAGTCAACGTAG 1002 0.5669 MAVELMVFPKLDEQKAIQEAASEGLNGMEHLIRILSHQPTHLNTDLTDGTVLKFKKLISLLNRTGHARFRRAPVHRSSSSPTTTSSSSLPPLPQLQALNISPPPQFTSPAPVAVHPAPASFVPAQPQSLTLDFTKPNNHILSSNAKSMELEFSKETFSVSSNSSFMSSAITGDGSVSNGKQGSSIFLTQSAAPAASGGKPPLSSAPFKKRCHDHRAHSDNISGSSKCHCIKRRKNRMKKTVRVPAISSKIADIPADEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAPDDPAMLIVTYEGEHRHTIHAAMQENAAGVVGLVFEST 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2284g00020 333 Gene3D WRKY domain 243 314 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2284g00020 333 MobiDBLite consensus disorder prediction 206 221 - -
Gabi2284g00020 333 Pfam Plant zinc cluster domain 208 252 IPR018872 -
Gabi2284g00020 333 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 317 IPR044810 GO:0003700
Gabi2284g00020 333 SMART WRKY_cls 254 314 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2284g00020 333 MobiDBLite consensus disorder prediction 191 225 - -
Gabi2284g00020 333 SUPERFAMILY WRKY DNA-binding domain 252 314 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2284g00020 333 ProSiteProfiles WRKY domain profile. 249 315 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2284g00020 333 MobiDBLite consensus disorder prediction 75 103 - -
Gabi2284g00020 333 Pfam WRKY DNA -binding domain 256 312 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2284g00020 333 MobiDBLite consensus disorder prediction 69 112 - -
Gabi2284g00020 333 FunFam WRKY transcription factor 65 238 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2284g00020 Gabi-Chr2284 219564 221864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2284g00020 1 332 WRKY Transcription Factor Family AT2G24570 61.337 6.32e-119 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi2284g00020 WRKY 7.8e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2284g00020 - - tpra:123902288 458.373