Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2284g00011 ATGTGGTTGCAAAAGAATCAGTGTGAGAAGAAGGATGGTGTGCATGGAATAGTGGCAGTGGCAATAGACACAGACAAGGGAAGCCAAAATGCACTCAAATGGGCCATTGATCATCTTCTCACAAAAGGTTCAAAAGTAGCTCTCATCCATGTCAAGCACAAGCCAGTTTCTCTTTCTTCATCACCTTCTATTTTTACCCCAAGTGACTACTATATTGTTTTACTCACTTTGTTGGTTGCAGGGGCAGGGATAAATGGTATTGGTGAGAGTGTAAATGTTTGCAAAGACCCTGATGAAAAAACCAAAGAAATTTTCCGCCCATATCGTGTCTTCTGTGCACGGAAAGATATACACTGTACGGACATTGTACTAGAAGATGTAGACGTGTCCAAAGCTTTAACTGAATATGCTGCTCAATCAGCAGTTGAGCATTTGGTCATAGGCTCTTCAAACAAAACTGGTTTTCTTAGAAGATTCAAGGTTGCAGATATTCCAGCAACAGTATCAAAAGGGGCACCGGATTTCTGTACAGTATATGTTGTTTCTAAAGGAAAGATTCAATCAATGAGATCTGCTTCTCGTCCTGCTCCTGCCTTTTGCCCTCTACAAAGCCAGCTTAGTCAAGCCTCTTATAGGTCAGACCAACCAGACACACGTGTGGCAATGGCTAATACGGCTAATGAAAGGCGATCCTTCGAGGCTCCACGTAGATCACATGATGGAACAGAATCCTTCAGGTCGCCATTCACTAGGAGAGGTGTGAATGACAAGTCATATGGGGAAATTTCCTTGCCAGATACTGACATAACTTTTGTGAGCTCTGGAAGGCCAAGCACAGACCGGTTATTCCCTTACTCATATAATAACAACTCAGATGCTGCGTTTTCCAACCCTCGGCTATCATATAGCTCTGACACAGATGGAAATCAAAGCTTTGAATCAATGCATTTTGGAAGGAGGTCTATGGATTTCAGCTCTCCTGAATTCTCATCTTTCTCACATGATAGTGAGGGGTTATCATCTTCTACAACATCACAGGATGATGTGGAGGCTGAAATGAGGAGACTGAAGTTGGAGCTCAAGCAAACAATGGAAATGTATAGCACAGCATGTAAAGAAGCACTCACAGCACAACAAAAGGCTGTGGAACTTCAGCGTTGGAAATTAGAGGAAGAAAGGAGATTGGAGGAGGCAAGGCAAGCTGAAGAAGCTGCATTGGCAATGGCACAAAAGGAGAAGGCTAAATCAAGAGCAGCCATTGAGGCTGCTGAAGCACAGAAGAGGATTGCAGAATTTGAAGCCCAGAAGAGAATTAATGCTGAAATGAAAGCATTTAGAGAAGCTGAGGAGAAAAGAAAAGCAGTTGATGCTTTAACAAGCAAAAATGTGAGGTATAGAAAGTATTCAATTGAGAAGATTGAAGCTGCAACAAATTTTTTTTCAGAGTCCCTGAAGATTGGAGAAGGGGGTTATGGTCCAGTTTATAAGTGCCGTCTTGACCATACACCTGTTGCAGTTAAGGTTCTACGTCCTGATGCAGCACAAGGAAGGTCACAGTTTCAAAGAGAGGTTGAGGTATTGAGTTGCATTAGGCATCCAAACATGGTTCTCCTTCTAGGAGCCTGTCCAGAGTATGGTTGCCTTGTTTATGAGCACATGACTAATGGAAGCTTAGATGATCGCCTTTTTTGTAGAGGAAATAGTCCTCCAATTCCTTGGCAACTTAGGTTCAAAATAGCAGCTGAAATAGGCAGTGGCTTGTTGTTTCTCCACCAGACAAAACCTGAGCCTCTAGTTCACAGGGATTTGAAACCAGCTAACATATTGCTTGACAGAAACTATGTGGCAAAGATAAGTGATGTAGGTTTGGCAAGGCTAGTTCCACCATCTGTGGCTGACACTGTGACACAATATTGCATGACATCAGCTGCTGGAACTTTCTGCTATATAGATCCTGAGTATCAGCAGACAGGAATGTTAGGAGTAAAATCTGATATATACTCACTTGGGATCATTTTCCTCCAAATATTGACAGCAAGACCACCAATGGGTTTGACTCATCATGTTGATAGAGCCATTGAGAAGGGAGTATTTGGTGATATGCTTGATCCAAATGTGAATGATTGGCCAGTAGAGGAGGCCTTGAGCCTTGCAAAGATAGGCCTCAAGTGTGCTGAATTAAGAAGGAAAGATAGACCTGATCTTGGCAAAGAAGTGCTACCAGAACTAGACAAGTTAAGAGCACTTGCTGAAAGTTCTGATCAGTATTCTGTGTTTAGTGGCTACACAAGCCCATCCAATCAGAGCCAAGTTTCTCTTCAGCTGGATGGAGGTAGTTCTCCGCTACATTATTCTGGGGAGAGTTCAAGGAACACATCAAGCCCTATCTGA 2391 0.4279 MWLQKNQCEKKDGVHGIVAVAIDTDKGSQNALKWAIDHLLTKGSKVALIHVKHKPVSLSSSPSIFTPSDYYIVLLTLLVAGAGINGIGESVNVCKDPDEKTKEIFRPYRVFCARKDIHCTDIVLEDVDVSKALTEYAAQSAVEHLVIGSSNKTGFLRRFKVADIPATVSKGAPDFCTVYVVSKGKIQSMRSASRPAPAFCPLQSQLSQASYRSDQPDTRVAMANTANERRSFEAPRRSHDGTESFRSPFTRRGVNDKSYGEISLPDTDITFVSSGRPSTDRLFPYSYNNNSDAAFSNPRLSYSSDTDGNQSFESMHFGRRSMDFSSPEFSSFSHDSEGLSSSTTSQDDVEAEMRRLKLELKQTMEMYSTACKEALTAQQKAVELQRWKLEEERRLEEARQAEEAALAMAQKEKAKSRAAIEAAEAQKRIAEFEAQKRINAEMKAFREAEEKRKAVDALTSKNVRYRKYSIEKIEAATNFFSESLKIGEGGYGPVYKCRLDHTPVAVKVLRPDAAQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEHMTNGSLDDRLFCRGNSPPIPWQLRFKIAAEIGSGLLFLHQTKPEPLVHRDLKPANILLDRNYVAKISDVGLARLVPPSVADTVTQYCMTSAAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTARPPMGLTHHVDRAIEKGVFGDMLDPNVNDWPVEEALSLAKIGLKCAELRRKDRPDLGKEVLPELDKLRALAESSDQYSVFSGYTSPSNQSQVSLQLDGGSSPLHYSGESSRNTSSPI 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2284g00011 796 Coils Coil 346 366 - -
Gabi2284g00011 796 Pfam Protein kinase domain 482 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2284g00011 796 MobiDBLite consensus disorder prediction 229 258 - -
Gabi2284g00011 796 Pfam Universal stress protein family 18 173 IPR006016 -
Gabi2284g00011 796 Gene3D Phosphorylase Kinase; domain 1 457 552 - -
Gabi2284g00011 796 MobiDBLite consensus disorder prediction 230 246 - -
Gabi2284g00011 796 ProSiteProfiles Protein kinase domain profile. 480 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2284g00011 796 PANTHER OS02G0152300 PROTEIN 18 783 - -
Gabi2284g00011 796 SMART serkin_6 480 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2284g00011 796 CDD STKc_IRAK 486 746 - -
Gabi2284g00011 796 MobiDBLite consensus disorder prediction 326 347 - -
Gabi2284g00011 796 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 452 552 - -
Gabi2284g00011 796 FunFam U-box domain-containing protein 51 553 753 - -
Gabi2284g00011 796 ProSitePatterns Serine/Threonine protein kinases active-site signature. 598 610 IPR008271 GO:0004672|GO:0006468
Gabi2284g00011 796 Gene3D HUPs 17 181 IPR014729 -
Gabi2284g00011 796 Gene3D Transferase(Phosphotransferase) domain 1 553 762 - -
Gabi2284g00011 796 MobiDBLite consensus disorder prediction 326 350 - -
Gabi2284g00011 796 SUPERFAMILY Protein kinase-like (PK-like) 462 735 IPR011009 -
Gabi2284g00011 796 MobiDBLite consensus disorder prediction 760 796 - -
Gabi2284g00011 796 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 18 170 - -
Gabi2284g00011 796 Coils Coil 372 435 - -
Gabi2284g00011 796 CDD STK_N 17 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2284g00011 Gabi-Chr2284 127493 132700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2284g00011 1 773 Receptor kinase-like Gene Family AT1G78940 55.416 0.0 790
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Gabi2284g00011 Pkinase 4.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2284g00011 - - gmx:100779981 1107.43