Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2284g00009 ATGGCTCATAAAAGAGCATACTATTGCTGCCTTCTCATGCTGTTTATGTTGGCCATTTGTTTTGTGCCATCATTGGGTGATGACACAAATGGTCAAATTTTGATGAGGTTCAAAAGCTTCTTGTCCAATGACACTGCTTTAGACAACTGGGGCACAGACTTAAATTTGTGCAACTGGAATGGTTTGTTATGCAAAAACCAGATATTTCATGGGTTGAGACTAGAGAATATGGGACTAAGTGGGAAGGTTGACGTAGAAACCTTGTTGGAATTGTCAAATTTGTTAAGTTTTAGTGTGATGAACAATAGTTTTGAAGGTTCAATGCCTGAATTCAAGAAGCTTGTGAAGTTAAGGGCATTGTTCCTGTCCAATAACAAATTCTCTGGTGAAATTCCGGATGATGCTTTTGTGGGCATGAATAGTCTTAAAAGGGTATTCTTGGCCGAAAATGGGTTCACAGGTCATATTCCAAAGTCGCTTGCTGATTTGTCTGGAGTTTTGGATTTGGACTTACACGGGAATAGTTTTGGAGGTAACATACCAGAATTTCAACAAAATGATTTCAGAGTGTTTAATTTATCCAACAACCAATTGGAGGGTCCAATACCACAAGGCTTAAGCAACCAGGATCCTAGCTCATTTGCTGGCAACAACGGCCTATGTGGAAAACCTATGAGCAGCCCTTGCAACAATAACTTCAATACCACCATTTCTGCGCCCAACTCCCAACGCAAGGGAGAGAAGCACCGCATCCTCATAACTGCCATTGTAGTGGTGGCTGTGGTTGCCTTGGCTTCAATGGTAGCACTTCTCTTTATCCATTGGCGCAGGAGGCAAAGCCTTCAACCCATAATGGACCATGAGGTTAATTTCAACAACAATGCAGGCTTCAAGGAGTCACAATCCATTGATCTTACAGGTGATTTCACGAACGATGATCATGAAGTATTGAACTTTGTTAAGAAAGATAGAGGGGGGTTTGATTTGCAAGACATGCTTAGAGCCTCAGCTGATGTTCTTGGTAGTGGCAGTTTTGGATCCACCTTCAAGGCTGTGGTTTTGAATGGAGCAACTGTAGTTGTGAAGAGATTTAGGTACATGAACAGGCTTGGGAAACATGAGTTCTTTGAGCACATGCAAAGGCTTGGAAGTTTGACACATCCTAATCTACTCCCTCTTGTTGCATTCTACTACAGAAAAGAAGAGAAATTCTTGGTTTATGACTTTGGTGAAAATGGTAGCTTGGCTGATCATCTACATGGTAGAAAGGGTTCTGTGCTAAACTGGTCAACTCGTTTGAAAATTATAAGAGGAGTAGCAAGGGGCTTAGCTTATCTCTATGGAGAGTTCCCAGGACAAAACCTACCTCATGGTCATCTAAAATCCTCCAATGTCATGTTGGACCATTCATTTGAGCCACGTTTGACAGAGTATGGACTTGTGCCAGTGATGAACAAGAGCCATGCTCAGCAGTTCATGGCAGGTTACAAGGCCCCAGAGATGAACCAATTTGACAGACCAAATGAGAAAACTGATGTTTGGTGTCTGGGGATCCTTATATTGGAACTGTTGACAGGGAAGTTCCCAGCAAATTATCTAAGACATGGGAGAGGTGTAAATGCTGATTTGGCAACTTGGGTGAACTCAGTTATAAGTGAAGAGTGGACAGGTGAGGTGTTTGATAAAGATATCATAGGGACAAGGAATGGTGAGGGTGAGATGCTGAAGCTGTTGAGGATTGGTATGTATTGCTGTGAATGGAGTGTTGAGAGTAGGTGGGATTGGAAGGAAGCAGTGGCAAAGATTGAGGAACTGAAGGAAAAGGATAGTGAAGATGAATCATCTTCTTATGTTAGTGAAGGAGATTTATACTCAAGGACTATGACTGATGATGACTTGATCTCTTTCTCTGTCACTAGATTTTGGGTTTTGGTGATGGTTTTGAAGGATATGGCTGAGGTGAAATCAGAGGAGTGTTGTATGGAGAATAAACAATCTACTACTGTTTCCTGTTCCTCTGTTTCTGAAGGCAGTGGCAGTGCAATTCACAAGTCTCCAGGGATATACGTCATTGGTTTAATCTCAGGAATTGGTGAAGTTTGTGAAAGTGTGGTGTCTGGTAGGAAGACAAAAATGGTGTTGTTGGAGCTTGACAACCTGAGAGGTCACAAGCTGAAGTGCACTTTGTGGGAGCATTATGTGGATGAGATGCAATCTTTTTTGGCAAACAACGACACTCCTCATAACATCATAATAGTTCAACTGGGAAGGATAAAATGTTTTAGGGAAATGACTGATGTAGCAATAATAGTTGATTGCTATGCTTTGAGATTGGCTGCCAGGTGTGCATCTCTAAAAGCTGATATGAGAAAAGCACTTAGGCAGAGAAGAATCCGAGTTGATGAGGGAAAGACCTCAAGAATTCCATGGGTTATTGACATTAAAAATCTCACCCTTTTTAGGGCTGCTATAGCAGGAGAGAAAAATGACAAAGGAGAGGCCATTGAAGGATGCAATGGGCAAGAATAG 2529 0.418 MAHKRAYYCCLLMLFMLAICFVPSLGDDTNGQILMRFKSFLSNDTALDNWGTDLNLCNWNGLLCKNQIFHGLRLENMGLSGKVDVETLLELSNLLSFSVMNNSFEGSMPEFKKLVKLRALFLSNNKFSGEIPDDAFVGMNSLKRVFLAENGFTGHIPKSLADLSGVLDLDLHGNSFGGNIPEFQQNDFRVFNLSNNQLEGPIPQGLSNQDPSSFAGNNGLCGKPMSSPCNNNFNTTISAPNSQRKGEKHRILITAIVVVAVVALASMVALLFIHWRRRQSLQPIMDHEVNFNNNAGFKESQSIDLTGDFTNDDHEVLNFVKKDRGGFDLQDMLRASADVLGSGSFGSTFKAVVLNGATVVVKRFRYMNRLGKHEFFEHMQRLGSLTHPNLLPLVAFYYRKEEKFLVYDFGENGSLADHLHGRKGSVLNWSTRLKIIRGVARGLAYLYGEFPGQNLPHGHLKSSNVMLDHSFEPRLTEYGLVPVMNKSHAQQFMAGYKAPEMNQFDRPNEKTDVWCLGILILELLTGKFPANYLRHGRGVNADLATWVNSVISEEWTGEVFDKDIIGTRNGEGEMLKLLRIGMYCCEWSVESRWDWKEAVAKIEELKEKDSEDESSSYVSEGDLYSRTMTDDDLISFSVTRFWVLVMVLKDMAEVKSEECCMENKQSTTVSCSSVSEGSGSAIHKSPGIYVIGLISGIGEVCESVVSGRKTKMVLLELDNLRGHKLKCTLWEHYVDEMQSFLANNDTPHNIIIVQLGRIKCFREMTDVAIIVDCYALRLAARCASLKADMRKALRQRRIRVDEGKTSRIPWVIDIKNLTLFRAAIAGEKNDKGEAIEGCNGQE 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2284g00009 842 Gene3D - 669 772 IPR012340 -
Gabi2284g00009 842 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
Gabi2284g00009 842 Pfam Leucine rich repeat N-terminal domain 30 64 IPR013210 -
Gabi2284g00009 842 ProSiteProfiles Protein kinase domain profile. 334 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2284g00009 842 SUPERFAMILY L domain-like 46 209 - -
Gabi2284g00009 842 Gene3D Phosphorylase Kinase; domain 1 306 409 - -
Gabi2284g00009 842 SUPERFAMILY Protein kinase-like (PK-like) 338 605 IPR011009 -
Gabi2284g00009 842 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 85 180 - -
Gabi2284g00009 842 FunFam Pollen receptor-like kinase 1 411 616 - -
Gabi2284g00009 842 Pfam Protein kinase domain 338 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2284g00009 842 Gene3D Ribonuclease Inhibitor 187 229 IPR032675 -
Gabi2284g00009 842 Gene3D Transferase(Phosphotransferase) domain 1 411 626 - -
Gabi2284g00009 842 Gene3D Ribonuclease Inhibitor 27 186 IPR032675 -
Gabi2284g00009 842 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 612 IPR046959 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2284g00009 Gabi-Chr2284 105684 118919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2284g00009 8 631 Receptor kinase-like Gene Family AT4G31250 43.824 0.0 537
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gabi2284g00009 Pkinase 4.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2284g00009 - - gmx:100781593 924.08