Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2282g00022 ATGTCGAGTTCATCGGAGTACTCAGAATTTCCCGGCCAGAAGCCGGCGAAGTCGCCGGAGAAGTCGACTTTCTCTCAGACTTGTAGTCTATTGAGTCAATATATCAAGGAGAAGGGTAGCTTCGGAGATCTTAGCCTCGGGATGACATGCAACACCGAACCAAGTGGGTCACCTGAGACATCTTGTCAGTCTGCAACAACCATGAACTTGTTTCCTACCAAGGAAAACAACGTGACACCAAAGAACCTGACAGCTATGGATTTGTTCTCTTCACAAGCTGCTTATCGTCCCAATCTACCAGCAGAAGAGATTCCAACCTTGATCAATTCCAGTGCAATTAAATCTGTGACCAAGGGACCTAAAGCTGCACAATTGACAATATTTTATGCTGGCCAAGTTATTGTATTTGATGATTTTCCTTCTGACAAAGCGAATGAGCTCATATCCTTTGCTGGCAAAGGAATCTCCCAAAGCCAGAACAATTCTCTTTATACTTACACACAGAGCCAGCCTTCATTTCCTTCAAATTTGGTTAGAACTTCTGCTGATTCAAGTACTCCAGTTATTCCTAGTGTGAATATTGTCCCTAGTACTGGCACCAATTCGATTCATGAGCACCCTCAAGCTTCATCCAGACCTGTTGTTTGTGATCTGCCAATTGCTAGGAAAGCTTCACTTCATCGGTTCCTGGAGAAAAGAAAGGATAGAATTGCTGCCAAGGCGCCATATCAATTGACAAATCCCATGGGGTCTGCTAATAAGCCAGCTGAATCCATGTCATGGCTTGGGTTGGGTGCTAAATCACCTCAAGTTTGA 816 0.4424 MSSSSEYSEFPGQKPAKSPEKSTFSQTCSLLSQYIKEKGSFGDLSLGMTCNTEPSGSPETSCQSATTMNLFPTKENNVTPKNLTAMDLFSSQAAYRPNLPAEEIPTLINSSAIKSVTKGPKAAQLTIFYAGQVIVFDDFPSDKANELISFAGKGISQSQNNSLYTYTQSQPSFPSNLVRTSADSSTPVIPSVNIVPSTGTNSIHEHPQASSRPVVCDLPIARKASLHRFLEKRKDRIAAKAPYQLTNPMGSANKPAESMSWLGLGAKSPQV 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2282g00022 271 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 17 255 IPR040390 -
Gabi2282g00022 271 ProSiteProfiles Tify domain profile. 118 153 IPR010399 -
Gabi2282g00022 271 MobiDBLite consensus disorder prediction 1 23 - -
Gabi2282g00022 271 Pfam tify domain 120 152 IPR010399 -
Gabi2282g00022 271 SMART tify_2 118 153 IPR010399 -
Gabi2282g00022 271 Pfam Jas motif 219 244 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2282g00022 Gabi-Chr2282 311954 314573 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2282g00022 1 267 Tify Gene Family AT1G19180 42.701 1.55e-58 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Gabi2282g00022 tify 6.7e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2282g00022 K13464 - gmx:100801449 411.764