Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2282g00019 ATGGCTTTAGCCATTTCCTCCACTGCATTGTCAAGCCTTCCAAACAGAGAAACACGTCAAAAGGTTTTCCCAGAAAGGACAGCCACATGTTTGACCATAACGAGAAGAACAACCATTACACATGCAACGAAAGGAGTGTCAGACGTGTGTCAACCACTTCCTCCAGATAGACCATTGTGGTTCCCTGGTAGTTCACCTCCTCCGTGGCTTGATGGCAGTCTTCCCGGTGATTTTGGTTTTGACCCTCTTGGATTAGGGTCTGATCCAGAGTTGCTTAAATGGTTTGCTCAGGCAGAGCTAATGCATGCTAGATGGGCAATGCTTGGAGTGTCTGGAATTCTCATTCCGGAATTGCTTGAAATGGATGGTTATGTTAAGAACTTCTCTTGGTATGATGCTGGTGCTCGAGAGTACTTTACAGATCCCACAACCTTGTTTTTTGTACAGTTACTCTTGATGGGTTGGGTTGAGGGTCGAAGATGGGCTGATATGGTTAACCCAGGTTGTGTTGACATTGAGCCTAAATTGCCAAATAGGCCTAACCCAAAGCCTGATGTTGGTTACCCTGGTGGGTTGTGGTTTGACCCCATGATGTGGGGACGAGGGTCCCCTGAGCCAGTCATGGTGTTGAGGACCAAGGAGATCAAGAATGGTCGTCTTGCAATGCTTGCTTTTGTTGGATTTTGGTTCCAAGCTATTTATACTGGTGAAGGCCCCATTGAAAATTTGATGGCACACATTGCTGATCCTGGTCACTGCAACATTTTCTCGGCATTCACATCGCGGTAG 789 0.4677 MALAISSTALSSLPNRETRQKVFPERTATCLTITRRTTITHATKGVSDVCQPLPPDRPLWFPGSSPPPWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLGVSGILIPELLEMDGYVKNFSWYDAGAREYFTDPTTLFFVQLLLMGWVEGRRWADMVNPGCVDIEPKLPNRPNPKPDVGYPGGLWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFWFQAIYTGEGPIENLMAHIADPGHCNIFSAFTSR 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2282g00019 262 SUPERFAMILY Chlorophyll a-b binding protein 56 261 - -
Gabi2282g00019 262 Gene3D Chlorophyll a/b binding protein domain 67 252 - -
Gabi2282g00019 262 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 4 260 IPR001344 GO:0009765|GO:0016020
Gabi2282g00019 262 Pfam Chlorophyll A-B binding protein 66 232 IPR022796 -
Gabi2282g00019 262 FunFam Chlorophyll a-b binding protein, chloroplastic 67 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2282g00019 Gabi-Chr2282 250299 252609 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2282g00019 55 262 Chloroplast and Mitochondria Gene Families AT3G61470 67.308 2.34e-103 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2282g00019 K08908 - gmx:100812066 472.241