Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2273g00021 ATGATGTCACTTTCACCTAGCTTAGGATCTCCGAATTTCTTGCTTAGAGAACTGAAACCCGAGGAAAGGGGTTTGTACTTGATCCATTTGTTGCTCTCTTGTGCAAATCATGTTGCTGCTGGAAGTCTTGAAAATGCAAATACCACACTTGAGCAAATTTCCCTTCTTGCATCCCCTGATGGGGATACTATGCAGCGGATTGCAGCATATTTTTCAGAAGCACTTGCTGATAGAATACTTAAAACATGGCCTGGGATTCACAGAGCACTCAACTCAACTAGAATGATTATGGTTTCTGAAGAAATTCTTGTTCAGAAGCTCTTCTTTGAGCTTTTCCCTTTCTTGAAGGTAGCTTTTGCTCTGACAAATCAGGCAATCATTGAAGCAATGGAAGGGGAGAAAATGATTCATATAATCGATCTCAATGCTGCTGAACCTGCTCAGTGGATTTCTCTCCTCCAAGTTTTGAGTGCACGTCCTGAAGGCCCTCCTCATTTGAGAATCACTGGTGTTCATCAGAAGAAAGAGATTCTGGATCAGATAGCTCATAGGCTGACTGAAGAAGCAGAAAAGTTGGATATACCATTCCAGTTCAATCCTGTAGTCAGCAAATTGGAAAACCTTGATTTTGACAAACTTCGTGTAAAAACTGGGGAGGCACTAGCAATAAGTTCTATTCTCCAATTGCATTCCCTTTTAGCTTTGGATGATGAAGCCATGCAGAGAAAATCTCCTCTTCTGTCAAAAAGCTCAAATGGAATTCACCTGCAAAGAGTGCTGCCAATGAGCCAAAGCACATTGGGTGATTTGCTTGAGAAAGATATGGTTAATGGGTATACGTATACCCCAAGTCCTGACTCAACCTCATCGTCACCAGCATCTTTAAGTACTTCAAATTTGATGAACATGGAAAGCTTTCTTAATGCCTTGTGGGTATTATCACCAAAGGTCATGGTTGTAACAGAACAAGACTCTAATCATAATGGTTCAACTCTAATGGAGAGGCTACTAGAAGCTCTATATTCTTATGCAGCATTATTTGATTGTGTGGAATCCACTGTCTCAAGAACATCCTTGGAGAGATTTAGGGTGGAGAAGATGCTTTTTGGTGAGGAAATCAAGAACATAATTGCATGTGAGGGGTCTGAACGAAAGGAAAGGCATGAAAAGCTGGATAAGTGGTTCCAGAGATTTGATTTAGCTGGGTTTGGTAACGTGCCTTTAAGTTATTTTGGTATGTTGCAAGCAAATCGGTTGCTACAAAGCTATGGTTGTGAGGGATACAGAATGAGGGACGAAAATGGTTGTGTACTAATTTGCTGGCAGGATCGGTCCTTGTTTTCAATATCAGCTTGGAGATCTAGGAAGTAA 1371 0.4099 MMSLSPSLGSPNFLLRELKPEERGLYLIHLLLSCANHVAAGSLENANTTLEQISLLASPDGDTMQRIAAYFSEALADRILKTWPGIHRALNSTRMIMVSEEILVQKLFFELFPFLKVAFALTNQAIIEAMEGEKMIHIIDLNAAEPAQWISLLQVLSARPEGPPHLRITGVHQKKEILDQIAHRLTEEAEKLDIPFQFNPVVSKLENLDFDKLRVKTGEALAISSILQLHSLLALDDEAMQRKSPLLSKSSNGIHLQRVLPMSQSTLGDLLEKDMVNGYTYTPSPDSTSSSPASLSTSNLMNMESFLNALWVLSPKVMVVTEQDSNHNGSTLMERLLEALYSYAALFDCVESTVSRTSLERFRVEKMLFGEEIKNIIACEGSERKERHEKLDKWFQRFDLAGFGNVPLSYFGMLQANRLLQSYGCEGYRMRDENGCVLICWQDRSLFSISAWRSRK 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2273g00021 456 Pfam GRAS domain family 27 453 IPR005202 -
Gabi2273g00021 456 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 24 448 IPR005202 -
Gabi2273g00021 456 ProSiteProfiles GRAS family profile. 18 453 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2273g00021 Gabi-Chr2273 184026 186294 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2273g00021 2 456 GRAS Transcription Factor Family AT1G50420 67.532 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi2273g00021 GRAS 1.9e-137 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2273g00021 - - gmx:100814131 792.727