Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2273g00019 ATGGGATTTATGTTGCAAGAAGAAGGGTCATCTTCTGTAACTCCTTCACCACTGCAGTTTTTCTCCATGATGTCACTTTCACCTAGCTTAGGATCTCCGAATTTCTTGCTTAGAGAACTGAAACCCGAGGAAAGGGGTTTGTACTTGATCCATTTGTTGCTCTCTTGTGCAAATCATGTTGCTGCTGGAAGTCTTGAAAATGCAAATACCACACTTGAGCAAATTTCCCTTCTTGCATCCCCTGATGGGGATACTATGCAGCGGATTGCAGCATATTTTTCAGAAGCACTTGCTGATAGAATACTTAAAACATGGCCTGGGATTCACAGAGCACTCAACTCAACTAGAATGATTATGGTTTCTGAAGAAATTCTTGTTCAGAAGCTCTTCTTTGAGCTTTTCCCTTTCTTGAAGGTAGCTTTTGCTCTGACAAATCAGGCAATCATTGAAGCAATGGAAGGGGAGAAAATGATTCATATAATCGATCTCAATGCTGCTGAACCTGCTCAGTGGATTTCTCTCCTCCAAGTTTTGAGTGCACGTCCTGAAGGCCCTCCTCATTTGAGAATCACTGGTGTTCATCAGAAGAAAGAGATTCTGGATCAGATAGCTCATAGGCTGACTGAAGAAGCAGAAAAGTTGGATATACCATTCCAGTTCAATCCTGTAGTCAGCAAATTGGAAAACCTTGATTTTGACAAACTTCGTGTAAAAACTGGGGAGGCACTAGCAATAAGTTCTATTCTCCAATTGCATTCCCTTTTAGCTTTGGATGATGAAGCCATGCAGAGAAAATCTCCTCTTCTGTCAAAAAGCTCAAATGGAATTCACCTGCAAAGAGTGCTGCCAATGAGCCAAAGCACATTGGGTGATTTGCTTGAGAAAGATATGGTTAATGGGTATACGTATACCCCAAGTCCTGACTCAACCTCATCGTCACCAGCATCTTTAAGTACTTCAAATTTGATGAACATGGAAAGCTTTCTTAATGCCTTGTGGGTATTATCACCAAAGGTCATGGTTGTAACAGAACAAGACTCTAATCATAATGGTTCAACTCTAATGGAGAGGCTACTAGAAGCTCTATATTCTTATGCAGCATTATTTGATTGTGTGGAATCCACTGTCTCAAGAACATCCTTGGAGAGATTTAGGGTGGAGAAGATGCTTTTTGGTGAGGAAATCAAGAACATAATTGCATGTGAGGGGTCTGAACGAAAGGAAAGGCATGAAAAGCTGGATAAGTGGTTCCAGAGATTTGATTTAGCTGGGTTTGGTAACGTGCCTTTAAGTTATTTTGGTATGTTGCAAGCAAATCGGTTGCTACAAAGCTATGGTTGTGAGGGATACAGAATGAGGGACGAAAATGGTTGTGTACTAATTTGCTGGCAGGATCGGTCCTTGTTTTCAATATCAGCTTGGAGATCTAGGAAGTAA 1437 0.4106 MGFMLQEEGSSSVTPSPLQFFSMMSLSPSLGSPNFLLRELKPEERGLYLIHLLLSCANHVAAGSLENANTTLEQISLLASPDGDTMQRIAAYFSEALADRILKTWPGIHRALNSTRMIMVSEEILVQKLFFELFPFLKVAFALTNQAIIEAMEGEKMIHIIDLNAAEPAQWISLLQVLSARPEGPPHLRITGVHQKKEILDQIAHRLTEEAEKLDIPFQFNPVVSKLENLDFDKLRVKTGEALAISSILQLHSLLALDDEAMQRKSPLLSKSSNGIHLQRVLPMSQSTLGDLLEKDMVNGYTYTPSPDSTSSSPASLSTSNLMNMESFLNALWVLSPKVMVVTEQDSNHNGSTLMERLLEALYSYAALFDCVESTVSRTSLERFRVEKMLFGEEIKNIIACEGSERKERHEKLDKWFQRFDLAGFGNVPLSYFGMLQANRLLQSYGCEGYRMRDENGCVLICWQDRSLFSISAWRSRK 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2273g00019 478 Pfam GRAS domain family 49 475 IPR005202 -
Gabi2273g00019 478 ProSiteProfiles GRAS family profile. 40 475 IPR005202 -
Gabi2273g00019 478 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 45 470 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2273g00019 Gabi-Chr2273 184026 186294 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2273g00019 1 478 GRAS Transcription Factor Family AT1G50420 67.078 0.0 661
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi2273g00019 GRAS 2.3e-137 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2273g00019 - - gmx:100814131 814.683